Pairwise Alignments

Query, 407 a.a., proline/arginine ABC transporter, permease component (from data) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 418 a.a., branched chain amino acid transporter - permease subunit from Pseudomonas putida KT2440

 Score =  333 bits (853), Expect = 7e-96
 Identities = 180/337 (53%), Positives = 223/337 (66%), Gaps = 33/337 (9%)

Query: 83  RSDARLRTPA--------------LLAVLVVFAVLPMLVSTYQTNIMISALLYVMLGLGL 128
           RSD +L  PA              ++ ++VV  V P   S    +I    L+YV+LGLGL
Sbjct: 71  RSDRKLIPPAVSNYLTLPKTQRYVIIGLIVVALVWPFFGSRGAVDIATLILIYVLLGLGL 130

Query: 129 NIVVGLSGQLVLGYVAFYAVGAYAYALLNADFGLGFWTVLPIGGALAAVFGILLGFPVLR 188
           NIVVGL+G L LGYV FYAVGAY+YA+L+   G  FW  LPI G +AA FG LLGFPVLR
Sbjct: 131 NIVVGLAGLLDLGYVGFYAVGAYSYAMLSHYLGWSFWVCLPIAGLMAATFGFLLGFPVLR 190

Query: 189 LKGDYLAIVTLGFGEIVRLVLENWGSVTRGPSGISKIARPGLFGMELSVSEA-------- 240
           L+GDYLAIVTLGFGEI+RL L N    T GP+GIS I +P  FG+      A        
Sbjct: 191 LRGDYLAIVTLGFGEIIRLFLRNLTDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTFHE 250

Query: 241 -----------TTYIYYLILAAVIFTIFAVGRLKDSRIGRAWQALREDEIACEAMGIDLT 289
                        ++Y + L   +  +F + RL    IGRAW+ALREDEIAC A+G++ T
Sbjct: 251 FFGLQYNSINKVIFLYLVALLLALLALFVINRLLRMPIGRAWEALREDEIACRALGLNPT 310

Query: 290 TTKLTAFALGACWAGFAGVIFAAKTTFINPASFTFLESAMILAMVVLGGMGSTLGVVLGA 349
             KL+AF LGAC+AGFAG  FAA+   + P SFTF+ESA+ILA+VVLGGMGS LGV+L A
Sbjct: 311 VIKLSAFTLGACFAGFAGSFFAARQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAA 370

Query: 350 LVLILLPEYLRAFSEYRMLIFGAAMVLMMVFRPQGLV 386
           +V+ILLPE +R FSEYRML+FGA MVLMM++RPQGL+
Sbjct: 371 IVMILLPELMREFSEYRMLMFGALMVLMMIWRPQGLL 407