Pairwise Alignments

Query, 372 a.a., high-affinity branched chain amino acid ABC transporter, periplasmic branched chain amino acid-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 369 a.a., leucine transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  224 bits (571), Expect = 3e-63
 Identities = 122/356 (34%), Positives = 196/356 (55%), Gaps = 3/356 (0%)

Query: 7   KALIAGMTVAVMAGPVFAGDTIKLGVPGAHSGDLASYGLPSANAAKIVAKMFNDKGGING 66
           K +IAGM    ++    A D IK+ V GA SG +A +G    N A+   K  N KGGI G
Sbjct: 6   KTIIAGMIALAISHTAMADD-IKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKG 64

Query: 67  KMVEVIPQDDQCKPEMATNAATKLVSDGVDIVLGHICSGATKAALPIYKEANKVVMSPSA 126
             +  +  DD C P+ A   A K+V+DG+  V+GH+CS +T+ A  IY++   +++SP A
Sbjct: 65  DKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGA 124

Query: 127 TTPALTQSGDYPMFFRTISSDDQQAKLGVDFAIDKLGAKKIAVLHDKGDYGKGYAEYAKQ 186
           T P LTQ G Y    RT   D  Q      + ++ +  ++IA++HDK  YG+G A   + 
Sbjct: 125 TNPELTQRG-YQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQD 183

Query: 187 FIEQSGKATVVLFEGVTPGAVDYSAVVQKVRSEGADAVMFGGYHPEASKIVAQMRKKRMT 246
            ++ +  A VV F+G+T G  D+SA++ +++ E  D V +GGY+PE  +++ Q R   + 
Sbjct: 184 GLK-AANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLK 242

Query: 247 TPFISDDGVKDDTFIKVAGKDAEGVYASSSKDVSMLPMYKEAIELHKKEFGTEPGAFYKE 306
           T F+  +GV + +   +AG  AEG+  +  K     P  +  ++  K +     G +   
Sbjct: 243 TQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWI 302

Query: 307 AFAAAQALLTAVQRAGSTETPKVVDALRNNFVETAIGKIKFDKRGDAEGTGFSMYQ 362
            +AA Q+L TA++R GS E   +V  L+ N   T IG + +D++GD +G  F ++Q
Sbjct: 303 TYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQ 358