Pairwise Alignments

Query, 372 a.a., high-affinity branched chain amino acid ABC transporter, periplasmic branched chain amino acid-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 369 a.a., Leu/Ile/Val-binding protein from Azospirillum sp. SherDot2

 Score =  213 bits (541), Expect = 9e-60
 Identities = 122/351 (34%), Positives = 186/351 (52%), Gaps = 2/351 (0%)

Query: 16  AVMAGPVFAGDTIKLGVPGAHSGDLASYGLPSANAAKIVAKMFNDKGGINGKMVEVIPQD 75
           A++AG   A   I +G+  A +G +A+ G  S   AK      N KGG+ G+ + +   D
Sbjct: 13  ALLAGFGTAQADIVIGLGTATTGPVAALGEQSVYGAKQAVADINAKGGVLGQKLVLKVGD 72

Query: 76  DQCKPEMATNAATKLVSDGVDIVLGHICSGATKAALPIYKEANKVVMSPSATTPALTQSG 135
           D C P  A   A + V + V  V+GH+CSGA+  A  +Y+E   V+++P+AT P LT  G
Sbjct: 73  DACDPRQAVAVANQFVREKVTAVVGHLCSGASIPAADVYQEEGVVMVTPTATNPLLTAKG 132

Query: 136 DYPMFFRTISSDDQQAKLGVDFAIDKLGAKKIAVLHDKGDYGKGYAEYAKQFIEQSGKAT 195
            +P  FR    DDQQ  +   +       K +AVL DK  YGKG A+   + +E++G   
Sbjct: 133 -HPNIFRVCGRDDQQGVVAGTYLAQTFKGKNVAVLDDKQAYGKGLADVVVETLEKAG-GK 190

Query: 196 VVLFEGVTPGAVDYSAVVQKVRSEGADAVMFGGYHPEASKIVAQMRKKRMTTPFISDDGV 255
           V     VT G  D+SA++  ++ +  DAV +GGYHPE   IV Q +++ M   FI+ DG+
Sbjct: 191 VAYRGSVTAGEKDFSALITSLKDKSIDAVYYGGYHPELGLIVRQAQEQGMKPQFIAGDGL 250

Query: 256 KDDTFIKVAGKDAEGVYASSSKDVSMLPMYKEAIELHKKEFGTEPGAFYKEAFAAAQALL 315
            +  +  + G   EG   + S   +  P  +E I   KK    EPG F   ++AA Q + 
Sbjct: 251 NNQEYWSITGPAGEGTLYTDSASAASDPKAQELIASFKKAGLPEPGNFAFYSYAAVQVIA 310

Query: 316 TAVQRAGSTETPKVVDALRNNFVETAIGKIKFDKRGDAEGTGFSMYQVKNG 366
             +Q+AGST++ K+   L +   +T +G ++FDK+GD     + MY   NG
Sbjct: 311 EGLQKAGSTDSGKLAKTLHSGSYDTVVGPVEFDKKGDITKPNYVMYVWNNG 361