Pairwise Alignments

Query, 349 a.a., ISDvu4, transposase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 346 a.a., IS481 family transposase from Erwinia tracheiphila SCR3

 Score =  279 bits (714), Expect = 7e-80
 Identities = 147/346 (42%), Positives = 206/346 (59%), Gaps = 8/346 (2%)

Query: 3   TGKKVARRKLSLLELASELDNVSKACRIMGYSRQQFYEIRRNYQTFGAEGLVDRLPGPRE 62
           T   + + K  LL LA EL NVSKAC+IMG SR  FY     YQ    EG +D L     
Sbjct: 4   TNNPIIKHKAGLLNLAEELGNVSKACKIMGVSRDTFYR----YQELAEEGGIDALVNQSR 59

Query: 63  PHPN---RVDEATEDRILAYSLEFPTHGPVRVAQQLVLQGVQVSSGGVRGVWSRNGMLTR 119
             PN   R DEATE  ++ Y++EFP HG  R + +L  +GV +S  GVR +W R+ +   
Sbjct: 60  RVPNLKNRADEATERAVVEYAVEFPAHGQHRTSNELRKKGVFISGSGVRSIWQRHDLENF 119

Query: 120 HERLLRLERHVRDTGIALNDDQVRTLERFSPEFRER-HIETRCSGDLVAVDTFFVGTLKG 178
            +RL  LE  V   GI L D Q+  LE+ + +      IET   G L + DTF+VG LKG
Sbjct: 120 RKRLKALEEKVAKEGIVLTDAQIAALEKKAHDDEASGEIETAHPGYLGSQDTFYVGNLKG 179

Query: 179 VGKIYLQSAIDCHSRYAFGRLYTSKLPVTAVHMLNESVLPFFEEHDTPVVTVLSDNGREF 238
           VG+IY Q+ +D +S+ A  +LYTSK P+TA  +LN+ VLPF+E    P++ +L+D G E+
Sbjct: 180 VGRIYQQTFVDTYSKVAHCKLYTSKTPITAADLLNDRVLPFYEAQGLPMLRILTDRGTEY 239

Query: 239 CGRPDRHPYELFLQLENIEHRTTRVRRPQSNGFVERLHRTLLDEHFRIQGRKNWYESLDE 298
           CG+ ++H Y+L+L + +I+H  T+   PQ+NG  ER H+T+L + +++  RK  Y  L+ 
Sbjct: 240 CGKVEQHDYQLYLAINDIDHTKTKAMSPQTNGICERFHKTILQDFYQVTFRKKLYGDLES 299

Query: 299 MQADLDAYLRHYNHERAHQGRNMSGRTPYQAFLDSRPEGQPKEDNE 344
           +QADLD  L H N+ER HQG+   GRTP    LD +     K  N+
Sbjct: 300 LQADLDNGLWHDNNERTHQGKMCCGRTPMATLLDGKRVWAEKNLNQ 345