Pairwise Alignments

Query, 349 a.a., ISDvu4, transposase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 354 a.a., IS481 family transposase from Erwinia tracheiphila SCR3

 Score =  281 bits (718), Expect = 2e-80
 Identities = 149/354 (42%), Positives = 210/354 (59%), Gaps = 16/354 (4%)

Query: 3   TGKKVARRKLSLLELASELDNVSKACRIMGYSRQQFYEIRRNYQTFGAEGLVDRLPGPRE 62
           T   + + K  LL LA EL NVSKAC+IMG SR  FY     YQ   AEG +D L     
Sbjct: 4   TNNPIIKHKAGLLNLAEELGNVSKACKIMGVSRDTFYR----YQELAAEGGIDALINQNR 59

Query: 63  PHPN---RVDEATEDRILAYSLEFPTHGPVRVAQQLVLQGVQVSSGGVRGVWSRNGMLTR 119
             PN   R DEATE  ++ Y++EFP HG  R + +L  +GV +S  GVR +W R+ +   
Sbjct: 60  RVPNLKNRADEATERAVVEYAVEFPAHGQHRTSNELRKKGVFISGSGVRSIWQRHDLENF 119

Query: 120 HERLLRLERHVRDTGIALNDDQVRTLERFSPEFRER-HIETRCSGDLVAVDTFFVGTLKG 178
            +RL  LE  V   GI L D Q+  LE+ + +      IET   G L + DTF+VG LKG
Sbjct: 120 RKRLKALEEKVAREGIVLTDAQIAALEKKAHDDEASGEIETAHPGYLGSQDTFYVGNLKG 179

Query: 179 VGKIYLQSAIDCHSRYAFGRLYTSKLPVTAVHMLNESVLPFFEEHDTP--------VVTV 230
           VG+IY Q+ +D +S+ A  +LYTSK P+TA  +LN+ VLPF+E    P        ++ +
Sbjct: 180 VGRIYQQTFVDTYSKVAHCKLYTSKTPITAADLLNDRVLPFYEAQGLPFYEAQGLPMLRI 239

Query: 231 LSDNGREFCGRPDRHPYELFLQLENIEHRTTRVRRPQSNGFVERLHRTLLDEHFRIQGRK 290
           L+D+G E+CG+ ++H Y+L+L + +I+H  T+   PQ+NG  ER H+T+L + +++  RK
Sbjct: 240 LTDSGTEYCGKVEQHDYQLYLAINDIDHTKTKAMSPQTNGICERFHKTILQDFYQVTFRK 299

Query: 291 NWYESLDEMQADLDAYLRHYNHERAHQGRNMSGRTPYQAFLDSRPEGQPKEDNE 344
             YE L+ +Q DLD +L HYN+ER HQG+   GRTP    LD +     K  N+
Sbjct: 300 KLYEDLESLQTDLDNWLWHYNNERTHQGKMCCGRTPMATLLDGKRVWAEKNLNQ 353