Pairwise Alignments

Query, 349 a.a., ISDvu4, transposase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 230 a.a., IS481 family transposase ISErsp1 from Escherichia fergusonii Becca

 Score =  196 bits (497), Expect = 6e-55
 Identities = 94/219 (42%), Positives = 140/219 (63%), Gaps = 1/219 (0%)

Query: 117 LTRHERLLRLERHVRDTGIALNDDQVRTLERFSPEFRE-RHIETRCSGDLVAVDTFFVGT 175
           +T  +RL  LE  V   GI L D Q+  LER + +      IET   G L + DT +VG 
Sbjct: 1   MTLTKRLKALEEKVARDGIELTDSQIAALERKASDNEACSEIETAHPGYLGSQDTLYVGN 60

Query: 176 LKGVGKIYLQSAIDCHSRYAFGRLYTSKLPVTAVHMLNESVLPFFEEHDTPVVTVLSDNG 235
           LKGVG+IY Q+ +D +S+ A  +LY +K P+TA  +LN+ VLPF+     P++ +L+D G
Sbjct: 61  LKGVGRIYQQTFVDTYSKVAHYKLYVTKTPITAADLLNDRVLPFYASQSLPMLRILTDRG 120

Query: 236 REFCGRPDRHPYELFLQLENIEHRTTRVRRPQSNGFVERLHRTLLDEHFRIQGRKNWYES 295
            E+CG+ ++H Y+L+L + +IEH  T+   PQ+NG  ER H+T+L+E +++  RK  Y  
Sbjct: 121 MEYCGKVEQHDYQLYLAINDIEHTKTKAMSPQTNGIYERFHKTILNEFYQVTFRKKLYGD 180

Query: 296 LDEMQADLDAYLRHYNHERAHQGRNMSGRTPYQAFLDSR 334
           LD +Q+DLD +L HYN+ER HQG+  +GRTP +  L  +
Sbjct: 181 LDTLQSDLDEWLAHYNNERTHQGKMCNGRTPMETLLGGK 219