Pairwise Alignments

Query, 1513 a.a., sensor/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1172 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  235 bits (599), Expect = 2e-65
 Identities = 179/626 (28%), Positives = 307/626 (49%), Gaps = 46/626 (7%)

Query: 847  TFMDITHVKHAEAMRQEARSLDEVSRNVPGVVFKLCAPHDGNIRV---------EYVGGG 897
            T  D T  K AE    +++ L E   N    V  +     G +R+          Y    
Sbjct: 241  TIQDTTKAKEAEENVIQSKKLLENVLNTSTEVSIIATDAKGIVRLFSKGAERMLGYAAEE 300

Query: 898  TVELCGLS----QEEIKADPHALVALFGPDVVPHILAGISATDGEGTPVDVEIPLHCTGG 953
             V+ C       +EEI+   H L   +G ++ P + A I  +  +G+  D +   +    
Sbjct: 301  VVDKCTPDIFHDKEEIQQSVHRLKEEYGQEIDP-LRAFIYESILKGS--DSKEWTYIRKD 357

Query: 954  TKWVHVQATSTPARGGGTE---WYGVAVDATERRYDATRMHNAADRYLRILDHAPMLIWR 1010
             + + V+ T +P R    E   + GVA D T+ +     +     R    + H P  +  
Sbjct: 358  KRRITVKLTMSPMRDDNGEINGYLGVATDITDEKKATQNLLIERARLHSFVKHVPAAVAM 417

Query: 1011 SDTTGACDWFNTTWLDFTGRTMEQEYGYGWAGGVHPDDYDRCVSIYQKAFA------LQQ 1064
             D       ++  W++  G   E   G       H + +      +Q+         + +
Sbjct: 418  LDNELKFIAYSDKWIEMYGLEKEDLIGKS-----HYEIFTNISEEWQEVHRRGLGGEVIK 472

Query: 1065 AFEMNYRLK--RHDGQFRWLVDCGKPLPDLDGTFSGFIGYCYDITDAVNALESMCEASKR 1122
              E  +R +   HD   RW +   +P         G +    DIT+A      + ++ + 
Sbjct: 473  CEEDVWRPEGWSHDQYVRWEI---RPWYRSKEKIGGILMLTEDITEAYFQKNDLQQSMRH 529

Query: 1123 AEEANRTKSEFLANVSHELRTPLNGALGMLQLLELSSLSPEQRQYVTTAIRSGQNLVRLL 1182
            AE+ANR KSEFLAN+SHE+RTPLNG +G   L+  + L+  Q QY++   +S  +L+ ++
Sbjct: 530  AEQANRAKSEFLANMSHEIRTPLNGIIGFSDLVLKTELNDRQEQYLSIVNQSANSLLNII 589

Query: 1183 SDILDLSRIEAGKLVIEAIPCDIRELVDEVFSTFSLDATGKGITLETTIAPGTPTYVRTD 1242
            +DILD S+IEAGKL ++    D+ ELV++     +     KG+ +   I+P  P +   D
Sbjct: 590  NDILDFSKIEAGKLDLDIERYDLYELVEQASDIITYVIHQKGLEMLLNISPNIPRFAWID 649

Query: 1243 PLRLRQTLFNLVGNAVKFTEKGGVRVE---FSTASMRGDAIVLFCTVRDTGPGIPEDRIE 1299
             +RL+Q L NL+GNA KFT+KG + ++    S ++  G+  + F +VRDTG GI  ++ +
Sbjct: 650  SVRLKQVLVNLLGNASKFTDKGEIELKLTPLSNSNKNGEMDIRF-SVRDTGIGIKSEKQD 708

Query: 1300 SIFQPFTQLDGSYTRRHSGLGLGLGIVCRLMELFGGSIEVESAPDMGTAMHFAIPVGKTR 1359
             IF+ F+Q D S T+++ G GLGL I  RL++L G  +++ S P+ G+  +F +   + +
Sbjct: 709  KIFEAFSQEDVSTTKKYGGTGLGLTISNRLLQLMGSKLQLTSTPNRGSTFYFDL---RIK 765

Query: 1360 RPQGRKVKETEDEGDRHALYLLVAEDDAINRLTLTRMLEQLGHRAHAVEDGSQALQALAE 1419
               G+ +     EG+ +   +L+ +D+A NR+ + RML   G +    ++G +A+Q L +
Sbjct: 766  CEDGQAIPL---EGEPNLHKILIVDDNANNRMIIERMLALKGIQTVQAKNGYEAIQRLVD 822

Query: 1420 -QHFDAVFLDIQMPVLDGMATLQAIR 1444
             + +D + +D QMP L+G+ T + IR
Sbjct: 823  GEEYDVILMDFQMPYLNGIDTARKIR 848



 Score = 55.1 bits (131), Expect = 4e-11
 Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 5/108 (4%)

Query: 1380 LLVAEDDAINRLTLTRMLEQLGHRAHAVE--DGSQALQALAEQHFDAVFLDIQMPVLDGM 1437
            +L  ED+AIN L    ++  +  +   +E  +G QAL+ L     D +F+D+QMP ++G 
Sbjct: 924  ILFVEDNAINMLLGKTVIHNISPKTTVLEASNGKQALELLKVNLPDMIFMDVQMPEMNGY 983

Query: 1438 ATLQAIRTGQVAGLPPTIPVVAVTAHAMQGDRERFMAKGADAYVQKPY 1485
               + IR          + + A+TA  ++G++E+ M  G D ++ KP+
Sbjct: 984  EATKIIRKEY---KNKNLLIFALTAGNLKGEKEKCMEAGMDDFIAKPF 1028