Pairwise Alignments

Query, 486 a.a., efflux transporter, RND family, MFP subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 388 a.a., RND transporter MFP subunit from Pseudomonas simiae WCS417

 Score =  180 bits (456), Expect = 9e-50
 Identities = 117/362 (32%), Positives = 199/362 (54%), Gaps = 11/362 (3%)

Query: 51  LLACCLVVAGACSRDEGKAKGARAKGPAPVTAAVAARQDIPVRLKAVGNVEASATVQVRS 110
           +L    V A A +R   K+K A A    PV     A+QDIP  +  +G+V +  +V +R 
Sbjct: 13  VLVVLAVAAWALTRP-AKSKLA-APTAIPVRVVSVAQQDIPRFVSGIGSVLSLHSVVIRP 70

Query: 111 RITGELTGIHFREGDDVRKGQKLFTIDPRPMEAALREARARQERTRAQLTKAEDDLRRFA 170
           ++ G LT +  +EG  V+ G  L TID R + A+L +A+A+   ++AQL  A  +L+R+ 
Sbjct: 71  QVDGILTKLLVKEGQLVKAGDLLATIDDRSIRASLDQAKAQLGESQAQLQVALVNLKRYK 130

Query: 171 SLVEGGFVSREQYEQIRTTAEGLRASLREAEAAVESAALQRDYCIITAPADARAGAVGAH 230
           +L     VS++ Y+Q +     L+A+ +  +AA++SA +Q  Y  I +P   R G     
Sbjct: 131 ALSVDDGVSKQTYDQQQALVNQLKATAQGNQAAIDSAQVQLSYTQIRSPVSGRVGIRTVD 190

Query: 231 IGNMIKANADDWLVTLDTVEPVYVSFSIPEVHLPAVLALRQSGTGRVL-----ARPDG-- 283
            GN ++ +    L ++  ++P+ V FS+P+  LP +  L  + T   +     A  DG  
Sbjct: 191 EGNFLRTSDAQGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAAPTQASVDAYLGADTDGQT 250

Query: 284 GDEV-EGRLDFVDNSVDTATGTIRLRATFDNRTRSLWPGRFVDVRLTLATHKDAVVVPSR 342
           GD + EG L  +DN + + TGT+R +A F+N ++ LWPG+ V +++  A  K+A+VVP  
Sbjct: 251 GDLLGEGHLSLIDNQISSTTGTLRAKAEFNNASQRLWPGQLVTIKIQTALDKNALVVPPT 310

Query: 343 AVQAGVDGPYAYVVADGRAELRNLAVGVQADTMTEVLQGIAPGEKVVVEGLMRLTPGAEV 402
            VQ G+D  + Y V   + ++  + V  Q D+   +++G+  G+ +V +G  RL  GA+V
Sbjct: 311 VVQRGLDSHFVYRVNGDKVDVVPVQVTYQ-DSDVNIIKGVQAGDVLVSDGQSRLKAGAQV 369

Query: 403 VI 404
            +
Sbjct: 370 EV 371