Pairwise Alignments

Query, 486 a.a., efflux transporter, RND family, MFP subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 388 a.a., Probable Co/Zn/Cd efflux system membrane fusion protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  231 bits (588), Expect = 4e-65
 Identities = 141/359 (39%), Positives = 205/359 (57%), Gaps = 14/359 (3%)

Query: 75  KGPAPVTAAVAARQDIPVRLKAVGNVEASATVQVRSRITGELTGIHFREGDDVRKGQKLF 134
           +GP  V    A  +D  V+ +AVG V    TV VRSR+ G+L  +  REG  V +GQ L 
Sbjct: 32  RGPVAVRVEPARTEDFTVQARAVGTVAPYNTVTVRSRVDGQLARVLVREGQKVARGQLLA 91

Query: 135 TIDPRPMEAALREARARQERTRAQLTKAEDDLRRFASLVEGGFVSREQYEQIRTTAEGLR 194
            IDP P+  AL +A+ +Q++  AQL  AE +L R+  L +   V+R+  ++     + LR
Sbjct: 92  EIDPEPLRVALAQAQGQQQQNLAQLRNAESELARYELLFKRDAVARQVLDRQAALVQQLR 151

Query: 195 ASLREAEAAVESAALQRDYCIITAPADARAGAVGAHIGNMIKANADDWLVTLDTVEPVYV 254
            +L+  EA V++A LQ  Y  I AP   R G      GN++ AN  + L TL   +PV V
Sbjct: 152 GTLKSDEAQVDNAKLQLSYTRIVAPIAGRIGLRRVDAGNLLSANDANGLFTLTQTQPVSV 211

Query: 255 SFSIPEVHLPAVLALRQSGTGRVLARPDGGDE------VEGRLDFVDNSVDTATGTIRLR 308
            F++PE   P V  +R +  G+   + +  D        +GRLD +DN +D ATGT+RL+
Sbjct: 212 VFNVPE---PQVAEVRAAHDGKQPPQAEAWDRDNRSRLAQGRLDTLDNQIDAATGTLRLK 268

Query: 309 ATFDNRTRSLWPGRFVDVRLTLATHKDAVVVPSRAVQAGVDGPYAYVVADGRAELRNLAV 368
           A F+N   +L+P +FV+VRL L     AV +P+ AVQ G  G Y YVVAD +A++R+L +
Sbjct: 269 ARFENADDALFPNQFVNVRLALRQLPGAVTIPTDAVQHGSRGTYVYVVADNKAQVRDLTL 328

Query: 369 GVQADTMTEVLQGIAPGEKVVVEGLMRLTPGAEV-VIRAADAGRNA----TASPADTTA 422
           G  +   T VL+G+  GE VV+EGL RL  G  V V++AA+   ++     A+PA  TA
Sbjct: 329 GPASGGRTVVLKGLVSGEPVVLEGLDRLENGRAVNVVQAAELPASSPLAPDAAPAAATA 387