Pairwise Alignments

Query, 358 a.a., Ech hydrogenase, subunit EchE, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 593 a.a., NADH-quinone oxidoreductase subunit C/D from Pseudomonas putida KT2440

 Score =  145 bits (366), Expect = 3e-39
 Identities = 96/379 (25%), Positives = 179/379 (47%), Gaps = 29/379 (7%)

Query: 9   GPQHPVLPEPLHLKLVVEDETVVEAIPALGYVHRGLETLASIRDYNQMVYVVERVCGICS 68
           GP HP       + L ++ E +V+ +P +GY HRG E +A  + ++  +   +R+  +  
Sbjct: 215 GPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMAERQSWHSFIPYTDRIDYLGG 274

Query: 69  CIHAMCYCQSLECMMNVEVPRRAKVLRTIWSELHRIHSHLLWLGLFADGFGFESLFMQFW 128
            ++ + Y  ++E +  ++VP++  V+R + +E  RI SHLL+LG +    G  +     +
Sbjct: 275 VMNNLPYVLAVEKLAGIKVPQKVDVIRIMLAEFFRITSHLLFLGTYIQDVGAMTPVFFTF 334

Query: 129 KVRERVMDINEATAGNRVVISTNIVGGVRRDLSPEHQKWILDEMNHLEREIRALMTTILD 188
             R+R   + EA  G R+  +   +GGV  DL     K + D +  L + +       L 
Sbjct: 335 TDRQRAYTVIEAITGFRLHPAWYRIGGVAHDLPRGWDKLVKDFVEWLPKRLDEYTKAALQ 394

Query: 189 DYTVCKRTKGVGVLTAQQAIQLGAVGPMLRGSGVAQDARQLQ-YAAFDELDFEPIAVPDG 247
           +  +  RT GV     ++A++ G  G  LR +G   D R+ + Y+ ++  +FE     +G
Sbjct: 395 NSILKGRTIGVAAYNTKEALEWGTTGAGLRATGCNFDLRKARPYSGYENFEFEVPLAHNG 454

Query: 248 DSWARCKVRFLEVLQSVDLVRQAISKLP------DTELSVKVPGK--------------- 286
           D++ RC VR  E+ QS+ ++ Q +  +P      D  L+   P +               
Sbjct: 455 DAYDRCMVRVEEMRQSIRIIDQCLRNMPEGPYKADHPLTTPPPKERTLQHIETLITHFLQ 514

Query: 287 -------PEGEVVARVEQPRGELMYYVKGNGSKHLERVRIRTPTFANIPPLLAIMGGLQL 339
                  P  E    +E  +G   YY+  +G     R RIRTP++ ++  + +++ G  +
Sbjct: 515 VSWGPVMPANESFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSYPHLQQIPSVIKGSMV 574

Query: 340 ADVPVAVLSIDPCISCTER 358
           AD+   + SID  ++  +R
Sbjct: 575 ADLIAYLGSIDFVMADVDR 593