Pairwise Alignments

Query, 715 a.a., response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 802 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Magnetospirillum magneticum AMB-1

 Score =  361 bits (926), Expect = e-104
 Identities = 214/546 (39%), Positives = 309/546 (56%), Gaps = 6/546 (1%)

Query: 170 LETLIESLPNPLFYKTLDGVYIGCNKAFSQLLGIPREKMVGRSARDLLPDHAYAQIIAGD 229
           LET +E  P  +      G     N+AF  + G   ++++GR+ R L      A +    
Sbjct: 250 LETALEQAPVSVMITDSHGAIEYVNRAFVLVSGYSEDEVLGRNPRLLKSGETVASLYRDM 309

Query: 230 CPSGSDAGEHSCVFDILGADGHIHTLALYKSTYSDSQGQVSGIVGTFLDITELKRKEAQI 289
               +              DG +       S   D  G V+  +    +IT+ K  E Q+
Sbjct: 310 WHCLASGATWQGELCNRAKDGSLFWEYATISPIRDDDGVVTHFMAVKENITQRKETEQQL 369

Query: 290 VHQATHDELTGLLNRFGMRQHVDRLIVGGQMS---FALLVIDLDDFKTINDSLGHALGDR 346
           VHQATHD LTGL NR  +   V   I   +       L+ +DLD FK +NDSLGH  GD 
Sbjct: 370 VHQATHDTLTGLPNRLLLEDRVHHAIEVAKREGRRIGLMFLDLDRFKIVNDSLGHVAGDE 429

Query: 347 LLHKAAERIVELVGSQGIVGRPGGDEYVVLLYNVDAEAAHA-MARRILDIFTDSLSVSGH 405
           LL   ++R+   +     V R GGDE+VV+L +  +    A +A +I     + + +SGH
Sbjct: 430 LLKVVSDRLRHTLRRSDTVARLGGDEFVVVLTHFQSTTELAEVAEKISAALDEPVELSGH 489

Query: 406 EVYISLSIGIAVYPEDGDDAANLFKCCDIAMYRAKEEGGARAQRYLAAMQDVITSRLALE 465
           +V++  SIGIA+YP+DGD+   L K  D AMYRAK++G      Y + M D    RL LE
Sbjct: 490 KVHVGASIGIAIYPDDGDNFNALMKDADTAMYRAKQKGRNTFCFYDSNMNDEALDRLKLE 549

Query: 466 KNLRKALERGEFVLHYQPKVDIRTGAVTGMEALVRWVRDDGTIVPPQDFIPVAEKTGLIV 525
           + LR+AL RGEF L YQP+VD++TG  +G+EAL+RW   +   V P  FIPVAE++ LI 
Sbjct: 550 EALRRALVRGEFQLFYQPQVDLQTGRTSGVEALIRWNSPERGQVSPALFIPVAEESNLIS 609

Query: 526 ALGEFVLREACRQMHAWQKR-FGRLKMAVNISARQF-QPGLPDTVASALADAGLDPGLLE 583
            +G +VL E+CRQ+ AW++     +K+AVN+S RQF    L + ++  +A   + P  LE
Sbjct: 610 MIGWWVLEESCRQIAAWREAGLTGIKVAVNVSGRQFLNHALVECISDLMAQYAVLPSQLE 669

Query: 584 LEITETTMMRDLALTVSVLERLTTGGIAVAIDDFGTGHSSLYYLKTFPISSIKIDRSFVR 643
           +E+TE+T+M +    +  L RL   GI V++DDFGTG+SSL YLK  P+S+IK+DRSFVR
Sbjct: 670 IELTESTVMAEPDRAIEQLTRLREIGIQVSVDDFGTGYSSLSYLKRLPLSTIKVDRSFVR 729

Query: 644 DIPNDETDATIVTTVVSMGRNLGIGIVAEGVETEAQLDFLRSLECPEVQGYYFSKPLPPH 703
           D+ N   +A IV+ ++ +   L + IVAEGVETE +   L+   C +VQG+ ++KP+P  
Sbjct: 730 DVNNQSDNAAIVSAILGLADALDMSIVAEGVETEGEEQHLKDAGCIKVQGFRYAKPMPAD 789

Query: 704 AFEAWM 709
              AWM
Sbjct: 790 QLAAWM 795



 Score = 29.3 bits (64), Expect = 8e-04
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 158 STQSELEDKSLFLETLIESLPNPLFYKTLDGVYIGCNKAFSQLLGIPREKMVGRSAR 214
           S  +E+ D   FL  L ES       +  DG+ +  N+ F Q+ G+  E+ +G SAR
Sbjct: 2   SLPAEITD---FLGILDESPVGVSVSRRRDGLVLFVNRRFCQITGMTPEQCIGHSAR 55