Pairwise Alignments

Query, 715 a.a., response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 880 a.a., CBS domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  346 bits (888), Expect = 2e-99
 Identities = 225/556 (40%), Positives = 309/556 (55%), Gaps = 43/556 (7%)

Query: 176 SLPNPLFYKTLDGVYIG--------CNKAFSQLLGIPREKMVGRSARDLLPDH------- 220
           +L   +   +LDG+ I          N AF+ + G   E+++G++   L   H       
Sbjct: 317 NLARKVIEASLDGIMIVDSTQKIEFVNPAFTHMTGYTAEEIIGKNPNVLKSGHHDETFYK 376

Query: 221 -AYAQIIAGDCPSGSDAGEHSCVFDILGADGHIHTLALYKSTYSDSQGQVSGIVGTFLDI 279
             Y  + A D   G               +G I+   L  +   D  G ++     F DI
Sbjct: 377 HMYTVLEAQDYWQGEIWNRRK--------NGEIYPEWLTINVIRDDTGDITQYAAIFSDI 428

Query: 280 TELKRKEAQIVHQATHDELTGLLNRFGMRQHVDRLIVG-------GQMSFALLVIDLDDF 332
           TE K+ E +I + A  D LT L NR   R   DRL +        GQ   A++ +DLD F
Sbjct: 429 TERKKTEERIKNLAYFDVLTALPNR---RLFTDRLQIAIANAHRHGQQ-LAIMFLDLDLF 484

Query: 333 KTINDSLGHALGDRLLHKAAERIVELVGSQGIVGRPGGDEYVVLLYNVD-AEAAHAMARR 391
           K INDSLGH +GD++L + A RI   V     V R GGDE+ VLL  +D  E    +A R
Sbjct: 485 KRINDSLGHGVGDQVLVETAARISHCVREGDTVARLGGDEFTVLLPELDHLEDVAKLAER 544

Query: 392 ILDIFTDSLSVSGHEVYISLSIGIAVYPEDGDDAANLFKCCDIAMYRAKEEGGARAQRYL 451
           ++        V  +E+Y++ SIGIAVYPEDG     L K  D AMYRAK+ G    Q Y 
Sbjct: 545 VIAHVKQPFLVDDNELYVTTSIGIAVYPEDGTTVEALIKNADTAMYRAKDLGRNSYQLYT 604

Query: 452 AAMQDVITSRLALEKNLRKALERGEFVLHYQPKVDIRTGAVTGMEALVRWVRDDGTIVPP 511
           AAM      RL +E +LR AL R EF L YQ KVD   G ++G+EALVRW   +  +V P
Sbjct: 605 AAMNARSFERLTMESSLRHALTREEFRLVYQVKVDSEDGRMSGVEALVRWHHPEMGLVSP 664

Query: 512 QDFIPVAEKTGLIVALGEFVLREACRQMHAWQK-RFGRLKMAVNISARQF-QPGLPDTVA 569
            DFIP+AE  G+I  +GE+VLR ACRQ   W       +++AVN+SA+QF +  +P+ VA
Sbjct: 665 VDFIPLAEAMGVISDIGEWVLRTACRQCKHWMDLGLPPVRIAVNVSAQQFVETDVPEVVA 724

Query: 570 SALADAGLDPGLLELEITETTMMRDLALTVSVLERLTTGGIAVAIDDFGTGHSSLYYLKT 629
            AL + GL P  LELE+TET +M+ +   V+VL+ L   G+ ++IDDFGTG+SSL YLK 
Sbjct: 725 RALRETGLPPQYLELELTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTGYSSLSYLKR 784

Query: 630 FPISSIKIDRSFVRDIPNDETDAT-----IVTTVVSMGRNLGIGIVAEGVETEAQLDFLR 684
            PI ++K+DRSFV DI + ++  T     IV+T++++  NL +  +AEGVET  Q +FLR
Sbjct: 785 MPIDALKVDRSFVNDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVETPEQAEFLR 844

Query: 685 SLECPEVQGYYFSKPL 700
           S  C EVQGY  S+P+
Sbjct: 845 SKGCDEVQGYLISRPV 860