Pairwise Alignments

Query, 715 a.a., response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 724 a.a., diguanylate cyclase from Agrobacterium fabrum C58

 Score =  343 bits (881), Expect = 1e-98
 Identities = 194/493 (39%), Positives = 285/493 (57%), Gaps = 10/493 (2%)

Query: 229 DCPSGSDAGEHSCV-FDILGADGHIHTLALYKSTYSDSQGQVSGIVGTFLDITEL----K 283
           D  S + +GE +   FDI  ++G  H     +         +   +G    +  L    K
Sbjct: 221 DPESLAHSGEDTAFSFDIPASEGKAHGFVWCRLAGRKPDEALVEFIGAAARMAGLAIDRK 280

Query: 284 RKEAQIVHQATHDELTGLLNRFGMRQHVDRLIVGGQMS---FALLVIDLDDFKTINDSLG 340
           R    I   A HD LT L NR  +   +  ++     +     +  +DLD+FK IND+LG
Sbjct: 281 RAAEHIAFLADHDMLTRLPNRRFLDTRLPEILAAAAKANRRVGIGFLDLDNFKQINDTLG 340

Query: 341 HALGDRLLHKAAERIVELVGSQGIVGRPGGDEYVVLLYNVDAEAAHAMARRILDIFTDSL 400
           H++GD LL K AERI   +G   +V R GGDE+V++L     +    + +RI    +  L
Sbjct: 341 HSIGDALLSKTAERIAASLGQNDLVLRVGGDEFVIILEEHKDDVEKHL-QRIRAAVSQPL 399

Query: 401 SVSGHEVYISLSIGIAVYPEDGDDAANLFKCCDIAMYRAKEEGGARAQRYLAAMQDVITS 460
            +  +++ ++ SIG+A +PE G   A +    D+AMY  K  G      +   M D +  
Sbjct: 400 RIRNYDIKVTCSIGMAFFPEHGKTTAEIVAAADLAMYEVKHNGRDSIATFTPNMADDLRK 459

Query: 461 RLALEKNLRKALERGEFVLHYQPKVDIRTGAVTGMEALVRWVRDDGTIVPPQDFIPVAEK 520
           +    + +RKA+ER EFVLH+QP+VD+  G ++G+EALVRW      ++ P +FI +AE+
Sbjct: 460 KFTRIEEMRKAVERDEFVLHFQPQVDLANGRISGVEALVRWQHPTEGLLGPVEFIGLAEE 519

Query: 521 TGLIVALGEFVLREACRQMHAWQKR-FGRLKMAVNISARQFQPGLPDTVASALADAGLDP 579
           TGLIV LG  +L++ACRQ  AW       +KMAVNIS RQFQ GL   + S L + GL P
Sbjct: 520 TGLIVELGANILKKACRQAQAWVAAGLSPVKMAVNISPRQFQGGLVQQIRSVLKETGLAP 579

Query: 580 GLLELEITETTMMRDLALTVSVLERLTTGGIAVAIDDFGTGHSSLYYLKTFPISSIKIDR 639
            LLE+EITET +++D+  +V ++  +   G+++A+DDFG G+S L  LKTFP+S +KIDR
Sbjct: 580 SLLEIEITETLIIQDVETSVRIMHAIKQMGVSLALDDFGIGYSCLGMLKTFPLSCMKIDR 639

Query: 640 SFVRDIPNDETDATIVTTVVSMGRNLGIGIVAEGVETEAQLDFLRSLECPEVQGYYFSKP 699
           SF+  +P    D+ IVT ++ +  +LGI ++AEGVET  Q +FLR+  CP  QGYYFS+P
Sbjct: 640 SFLTHLPEKTKDSAIVTIMIQLAGSLGIDVIAEGVETAEQANFLRTAGCPYGQGYYFSRP 699

Query: 700 LPPHAFEAWMENR 712
           LP  A EA + NR
Sbjct: 700 LPADAIEATLANR 712



 Score = 39.7 bits (91), Expect = 5e-07
 Identities = 33/151 (21%), Positives = 64/151 (42%), Gaps = 2/151 (1%)

Query: 145 RTRELRVSNEQLRSTQSELEDKSLFLETLIESLPNPLFYKTLDGVYIGCNKAFSQLLGIP 204
           + R++  S        +    +   LE +I+ +P+ ++ K L+G ++  N+A     G  
Sbjct: 4   KKRDITPSASPAMGENANPSGRHTLLEAMIDHVPDFIYAKDLEGRFLFANRAIVNENGFE 63

Query: 205 R-EKMVGRSARDLLPDHAYAQIIAGDCPSGSDAGEHSCVFDILGADGHIHT-LALYKSTY 262
             E+++G +  D+  + A    I          GE    ++     G +   L + +   
Sbjct: 64  SVEELIGLTDYDIHGEAARHAGIPDTEARVMRTGEPDLGYEERAMRGDVDRWLMMSRVPL 123

Query: 263 SDSQGQVSGIVGTFLDITELKRKEAQIVHQA 293
            D  G++ G+VG   DIT+ K  E  +  QA
Sbjct: 124 KDKSGEIIGVVGASRDITQKKASERLLQAQA 154