Pairwise Alignments

Query, 224 a.a., amino acid ABC tranporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 229 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  130 bits (326), Expect = 3e-35
 Identities = 75/202 (37%), Positives = 116/202 (57%), Gaps = 9/202 (4%)

Query: 7   VFGEMLPALNRGLITSMMLIVPSATLGLLFGIIVGTGRVFGPAWVRKAGDIYTATFRGVP 66
           V  + LP L  G   ++ L+  +   GL+  I +G  R     +VR     Y   FRG P
Sbjct: 5   VIFKWLPRLAEGATLTLELVAIAVVAGLILAIPLGIARSSRHWYVRAVPFSYIFFFRGTP 64

Query: 67  LVVQLMIIYFGLPNIGI--------YL-EPFPAAVLGFVLCSAAYNSEYVRGALLSIRQG 117
           L+VQL ++Y+GL             YL +PF   VL   L +AAY +E +RGAL +I +G
Sbjct: 65  LLVQLFLVYYGLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQAIPKG 124

Query: 118 QLKAAQALGFSKLKTVLFIVVPQAVRRALPGCGNEIIYLIKYSSLAYVITCIELTGEGKV 177
           +++AA+ALG S+ KT+ +I++P+A R  LP   NE+I ++K S+LA  +T +ELTG  + 
Sbjct: 125 EIEAARALGMSRGKTLFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184

Query: 178 VAARSFRFTEVFLFVGAYYLFL 199
           + AR++   E+F   G +YL +
Sbjct: 185 IIARTYLPVEIFFAAGVFYLVI 206