Pairwise Alignments

Query, 224 a.a., amino acid ABC tranporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 220 a.a., cystine ABC transporter permease from Serratia liquefaciens MT49

 Score =  144 bits (362), Expect = 2e-39
 Identities = 79/202 (39%), Positives = 121/202 (59%), Gaps = 2/202 (0%)

Query: 13  PALNRGLITSMMLIVPSATLGLLFGIIVGTGRVFGPAW-VRKAGDIYTATFRGVPLVVQL 71
           P L RG I ++ L +    LGLL G ++   R+  P W +     IY + FRG PL+ QL
Sbjct: 13  PFLLRGAILTLQLSLGGMALGLLLGFLLALMRL-SPLWPLSWLSRIYVSLFRGTPLIAQL 71

Query: 72  MIIYFGLPNIGIYLEPFPAAVLGFVLCSAAYNSEYVRGALLSIRQGQLKAAQALGFSKLK 131
            +IY+GLP  GI  +PFPAA++G  L +AAY SE +R A+ SI +GQ +AA ++G ++ +
Sbjct: 72  FMIYYGLPQFGIEFDPFPAALIGLSLNTAAYTSETLRAAISSIEKGQWEAAASIGMTRWQ 131

Query: 132 TVLFIVVPQAVRRALPGCGNEIIYLIKYSSLAYVITCIELTGEGKVVAARSFRFTEVFLF 191
           T+  +++PQA R ALP  GN  I L+K +SLA  I   EL  + +++ +R+     ++L 
Sbjct: 132 TLRRVILPQAARTALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLA 191

Query: 192 VGAYYLFLVTLASWILHRVEQH 213
               Y  + TL S + +R+E H
Sbjct: 192 ASLIYWVMATLLSALQNRLEAH 213