Pairwise Alignments

Query, 224 a.a., amino acid ABC tranporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 223 a.a., ABC transporter permease subunit from Dickeya dianthicola 67-19

 Score =  137 bits (344), Expect = 2e-37
 Identities = 80/209 (38%), Positives = 121/209 (57%), Gaps = 3/209 (1%)

Query: 10  EMLPALNRGLITSMMLIVPSATLGLLFGIIVGTGRVFGPAWVRKAGDIYTATFRGVPLVV 69
           ++ P +   L T+++L V S    ++ G+++   R      V K  + Y + FRG+P +V
Sbjct: 10  KVFPQVLMYLPTTLLLAVVSMLFAIVLGLVLALVRESRFVVVAKLVEFYISLFRGIPSLV 69

Query: 70  QLMIIYFGLPNIGIYLE---PFPAAVLGFVLCSAAYNSEYVRGALLSIRQGQLKAAQALG 126
           QL IIYFGLP +   L       AA++GF L ++AY +E  R AL S+  GQ +A  ++G
Sbjct: 70  QLFIIYFGLPQLFPSLNGLSAMTAAIIGFSLKNSAYMAEIFRAALASVDFGQTEAGLSVG 129

Query: 127 FSKLKTVLFIVVPQAVRRALPGCGNEIIYLIKYSSLAYVITCIELTGEGKVVAARSFRFT 186
            +K +    IV+PQA+  ALP  GN  I LIK +S+A+ +   EL  EGK++AA S RF 
Sbjct: 130 MNKAQIYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFAEGKMIAAESLRFF 189

Query: 187 EVFLFVGAYYLFLVTLASWILHRVEQHFS 215
           E FL VG  Y  L+ + SW+  ++E+  S
Sbjct: 190 ETFLVVGLIYWMLIVVYSWLQSQLEKKLS 218