Pairwise Alignments

Query, 607 a.a., sensory box/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 833 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Magnetospirillum magneticum AMB-1

 Score =  138 bits (347), Expect = 1e-36
 Identities = 80/188 (42%), Positives = 107/188 (56%)

Query: 412 DGPPPAVEGMAHDITAHKLAEMDLTRRIVTDPLTGLFNRAHMEDMLPRMLTRAAEDGRTL 471
           DG    +  +  D+T  KLA   +      D LT L NR   ++ L + L +A   G  L
Sbjct: 375 DGRRSGLVLVGRDVTERKLAAARIQHLAHHDALTELPNRVLFQERLRQSLAQAKRSGWKL 434

Query: 472 GLLFIDLDGFKAVNDTYGHAVGDTLLQQVAGRLRRRLRHTDIAIRLGGDEFAVLLWDVAG 531
            L+F+DLD FK +NDT GH VGD LL+ VA RL R +R TD   RLGGDEFAV+L ++  
Sbjct: 435 ALMFLDLDKFKDINDTLGHHVGDLLLRAVAKRLTRCVRETDTVARLGGDEFAVILTNLDD 494

Query: 532 KEAVERIGAGILSIMAPAFTCTDIPCSVSASIGASLYPQHADDAPSLLRLADEAMYRAKA 591
            E   R+   I++ +A  F   +     S SIG +LYP  + DA  LL+ AD AM+R+KA
Sbjct: 495 LEGASRVAESIIAGIADPFGLDEHEVRTSTSIGITLYPDDSIDADQLLKNADLAMFRSKA 554

Query: 592 EGKNRMAF 599
           EG+N   F
Sbjct: 555 EGRNNYHF 562



 Score = 49.7 bits (117), Expect = 5e-10
 Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 21/161 (13%)

Query: 145 DVTELDHRKEGLRDAHRFLQNVVDALPCPLFFKDMNGAYTLFNHAFSDMLGLTPENLQGK 204
           D+T     +  L +   +L  +++ALP  + FKD  G + + N  + D++GL+  +  G+
Sbjct: 256 DITLRKANEAELVNQKEWLTTLINALPDLICFKDGKGRWLVANQFYLDLVGLSGVDYVGR 315

Query: 205 NADDIAPPDLAAVYHSMDQALLDAKGPASQ--------RYESAFTTP-HGLRHVLFDKAT 255
                  P+LA + H+  + L  AK    +         YE A  TP  G +     K  
Sbjct: 316 TG-----PELARLSHNFQEFLTTAKETDERAWKDGKPLSYEKAMETPSRGTKVFDMLKIP 370

Query: 256 VVDDEGTARGLVGIITDITGRKQAEDALRRVEARIRALVHN 296
           +   +G   GLV +  D+T RK A        ARI+ L H+
Sbjct: 371 LFKPDGRRSGLVLVGRDVTERKLA-------AARIQHLAHH 404



 Score = 32.0 bits (71), Expect = 1e-04
 Identities = 44/195 (22%), Positives = 74/195 (37%), Gaps = 45/195 (23%)

Query: 162 FLQNVVDALPCPLFFKDMNGAYTLFNHAFSDMLGLTPENLQGKNADDIAPPDLA--AVYH 219
           FL+++ DA    +   D  G  TL+N    +  G+   +  G+   ++  P LA   V  
Sbjct: 9   FLRSLTDATEMGVILLDDEGRVTLWNAWLVESSGIRARDAMGRTIAELF-PSLADGRVAE 67

Query: 220 SMDQAL------------------LDAKGPASQRYESAFTTPHGLRHVLFDKATVVDDEG 261
           +++Q L                  L  KG    R E+       +  ++  K   +D +G
Sbjct: 68  AVEQTLANGLSAMLSSSLNRMLFPLTRKGSRPDRRET-------MHQIVVIKP--LDADG 118

Query: 262 TARGLVGIITDITGRKQAEDALRR--------------VEARIRALVHNASDGFFSVTPE 307
              GL+ I  D+T     E  LR+               E   RA+V N +D   +   +
Sbjct: 119 RRTGLIQIF-DVTSMASRETLLRQQARTMEALAENYRLSELHNRAIVDNTADAIVTFGED 177

Query: 308 GYITESNPAMCKLLG 322
           G I   NP+  ++ G
Sbjct: 178 GGIGTYNPSAERIFG 192