Pairwise Alignments

Query, 607 a.a., sensory box/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 802 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Magnetospirillum magneticum AMB-1

 Score =  162 bits (411), Expect = 4e-44
 Identities = 148/562 (26%), Positives = 232/562 (41%), Gaps = 46/562 (8%)

Query: 43  LFDDLPVGVFRSTLDGEHLLYANTSLAHLFGWPDAGAMIEGQTPRDLYASPTARDDILQR 102
           + D+ PVGV  S      +L+ N     + G      +  G + R  +A    R +++++
Sbjct: 13  ILDESPVGVSVSRRRDGLVLFVNRRFCQITGMTPEQCI--GHSARRHFADDDQRLEVVRQ 70

Query: 103 LQQAGEMTTDVIHLQRPGHAQRACILHLRID--NAMKTIEGWVMDVTELDHRKEGLRDAH 160
           L++AGE+    +   R   +    +L +R    N       W+ DV++    ++ + D  
Sbjct: 71  LKEAGEIADADVKFFRVDGSSFWSVLTIRSATLNGEAVNLAWLYDVSKRKQAEQAILDGK 130

Query: 161 RFLQNVVDALPCPLFFKDMNGAYTLFNHAFSDMLGLTPENLQGKNADDIAPPDLAAVYHS 220
             ++ ++D+    +   +  G     N A S +     ++L GK   D  P  + A    
Sbjct: 131 TLIRAMLDSSTDGIVLVNAEGTILAVNAAASAIFEKNSDDLPGKAIWDHLPDSVVAPMRR 190

Query: 221 MDQALLDAKGPASQRYESAFTTPHGLRHVLFD-KATVVDDEGTARGLVGIIT-DITGRKQ 278
               +LD +              H +   LFD    +V D    R  V I + D+T   Q
Sbjct: 191 GIDRVLDRRETVESH--------HAIGAKLFDVHMHLVADSVGQRDRVAIFSRDVTQSHQ 242

Query: 279 AEDALRRVEARIRALVHNASDGFFSVTPEGYITESNPAMCKLLGLKVAPSSGERGELTCV 338
               LR++E  +      A          G I   N A   + G                
Sbjct: 243 RRQQLRKLETALE----QAPVSVMITDSHGAIEYVNRAFVLVSGYS-------------- 284

Query: 339 APDDDESSDANRAQNILNLPDMFAE-GREAWDAALHRLGTGAPPAPFEVRVRRDDGQTVW 397
                E     R   +L   +  A   R+ W    H L +GA     E+  R  DG   W
Sbjct: 285 -----EDEVLGRNPRLLKSGETVASLYRDMW----HCLASGATWQG-ELCNRAKDGSLFW 334

Query: 398 LSLALWPVDSVPEEDGPPPAVEGMAHDITAHKLAEMDLTRRIVTDPLTGLFNRAHMEDML 457
               + P+    ++DG       +  +IT  K  E  L  +   D LTGL NR  +ED +
Sbjct: 335 EYATISPIR---DDDGVVTHFMAVKENITQRKETEQQLVHQATHDTLTGLPNRLLLEDRV 391

Query: 458 PRMLTRAAEDGRTLGLLFIDLDGFKAVNDTYGHAVGDTLLQQVAGRLRRRLRHTDIAIRL 517
              +  A  +GR +GL+F+DLD FK VND+ GH  GD LL+ V+ RLR  LR +D   RL
Sbjct: 392 HHAIEVAKREGRRIGLMFLDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVARL 451

Query: 518 GGDEFAVLLWDVAGKEAVERIGAGILSIMAPAFTCTDIPCSVSASIGASLYPQHADDAPS 577
           GGDEF V+L        +  +   I + +      +     V ASIG ++YP   D+  +
Sbjct: 452 GGDEFVVVLTHFQSTTELAEVAEKISAALDEPVELSGHKVHVGASIGIAIYPDDGDNFNA 511

Query: 578 LLRLADEAMYRAKAEGKNRMAF 599
           L++ AD AMYRAK +G+N   F
Sbjct: 512 LMKDADTAMYRAKQKGRNTFCF 533