Pairwise Alignments

Query, 607 a.a., sensory box/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 830 a.a., two-component system response regulator from Magnetospirillum magneticum AMB-1

 Score =  166 bits (420), Expect = 4e-45
 Identities = 141/457 (30%), Positives = 200/457 (43%), Gaps = 47/457 (10%)

Query: 156 LRDAHRFLQNVVDALPCPLFFKDMNGAYTLFNHAFSDMLGLTPENLQGKNADDIAPPDLA 215
           LR +    + + D     +   D  GAY   N AF  M+G +   LQ     DI  P+  
Sbjct: 139 LRTSESRFRALFDNAGTGVILSDAAGAYIHCNPAFCTMVGYSDAELQKMTYRDITYPEDM 198

Query: 216 AVYHSMDQALLDAKGPASQRYESAFTTPHGLRHVLFDKATVV----DDEGTARGLVGIIT 271
             +  M   ++  +   +  YE          ++L+ + TV       +   R  V ++ 
Sbjct: 199 NAHTQMRDDMMAGR---TDSYELTKRYIRRDGNILWARLTVTAMREGSDNELRFTVAVVE 255

Query: 272 DITGRKQAEDALRRVEARIRALVHNASDGFFSVTPEGYITESNPAMCKLLGLKVAPSSGE 331
           D+T +K+ ED +R        +  +  +G F    +  I   NPA  +L G         
Sbjct: 256 DVTEKKRLEDHMRLAAT----VFESTGEGLFVTDEKRQIIHVNPAFTELTGY-------- 303

Query: 332 RGELTCVAPDDDESSDANRAQNILNLPDMFAEGR---EAWDAALHRLGTGAPPAPFEVRV 388
                   P D+          I   P   A GR   E +DA    L         E+  
Sbjct: 304 --------PADEV---------IGRTPKFLASGRHTPEFYDAVFKTLAE-CGKWQGEIWN 345

Query: 389 RRDDGQTV--WLSLALWPVDSVPEEDGPPPAVEGMAHDITAHKLAEMDLTRRIVTDPLTG 446
           RR  G+    WL++++     V  E G       +  DIT+ K  E  L  +   DPLT 
Sbjct: 346 RRKTGEMFAEWLNISV-----VRNERGELTNYVAVFSDITSRKQDEERLNYQANHDPLTR 400

Query: 447 LFNRAHMEDMLPRMLTRAAEDGRTLGLLFIDLDGFKAVNDTYGHAVGDTLLQQVAGRLRR 506
           L NR   ++ L R LTRA  +   + LLFIDLD FK VNDT GH  GD LLQQVA RL  
Sbjct: 401 LPNRTLFQERLTRALTRAHRNQAIVALLFIDLDFFKQVNDTLGHLAGDILLQQVAERLTS 460

Query: 507 RLRHTDIAIRLGGDEFAVLLWDVAGKEAVERIGAGILSIMAPAFTCTDIPCSVSASIGAS 566
            +R  D   RL GDEF V+L +++       +   ILS++A  F        +S+SIG +
Sbjct: 461 CVRQGDTVARLAGDEFTVILEEISEPRDGAVVAHKILSLLAEPFDLQGHEARISSSIGVA 520

Query: 567 LYPQHADDAPSLLRLADEAMYRAKAEGKNRMAFAGPS 603
           LYP    DA +L++LAD AMYRAK +G+N   F   S
Sbjct: 521 LYPSDGGDAQTLIKLADAAMYRAKHQGRNACRFHSES 557



 Score = 38.5 bits (88), Expect = 1e-06
 Identities = 20/48 (41%), Positives = 24/48 (50%)

Query: 275 GRKQAEDALRRVEARIRALVHNASDGFFSVTPEGYITESNPAMCKLLG 322
           GR  A+ ALR  E+R RAL  NA  G       G     NPA C ++G
Sbjct: 131 GRSAADAALRTSESRFRALFDNAGTGVILSDAAGAYIHCNPAFCTMVG 178