Pairwise Alignments

Query, 607 a.a., sensory box/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 997 a.a., sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  154 bits (389), Expect = 2e-41
 Identities = 109/322 (33%), Positives = 145/322 (45%), Gaps = 26/322 (8%)

Query: 276 RKQAEDALRRVEARIRALVHNASDGFFSVTPEGYITESNPAMCKLLGLKVAPSSGERGEL 335
           R+  E ALRR E R R +  NA +G F + P+G +   NPAM ++ G     S  E G +
Sbjct: 418 RRSVEQALRRAEQRYRGIFENAVEGIFQIAPDGMLLRGNPAMAEMFGYSDIESLREVGSM 477

Query: 336 TCVAPDDDESSDANRAQNILNLPDMFAEGREAWDAALHRLGTGAPPAPFEVRVRRDDGQT 395
                                   MFAE   + D   H+L      + FE R R  + + 
Sbjct: 478 A---------------------EAMFAEATSS-DVFFHQLEMTGNVSGFEFRARHREDRE 515

Query: 396 VWLSLALWPVDSVPEEDGPPPAVEGMAHDITAHKLAEMDLTRRIVTDPLTGLFNRAHMED 455
           +WL +       V +        EG   DIT    +   L  +   DPLTGL NR    D
Sbjct: 516 LWLRVN---ARRVADAHDATLFYEGFLTDITISHRSRQQLAHQAYHDPLTGLPNRLLFLD 572

Query: 456 MLPRMLTRAAEDGRTL-GLLFIDLDGFKAVNDTYGHAVGDTLLQQVAGRLRRRLRHTDIA 514
            L   + RAA     +  +L++DLD FK +ND+ GH +GD LL++VA  LRR +R  D  
Sbjct: 573 HLQLAMQRAARRTDAMFTVLYLDLDRFKIINDSLGHGIGDALLREVACTLRRCVRDVDTV 632

Query: 515 IRLGGDEFAVLLWDVAGKEAVERIGAGILSIMAPAFTCTDIPCSVSASIGASLYPQHADD 574
            R GGDEFA+LL D        RI   I   +A            +ASIG  L  +    
Sbjct: 633 ARFGGDEFAILLEDTGNCAGAVRIARRIRESLAQPVNIAGHEVFTTASIGIVLQTRDYLT 692

Query: 575 APSLLRLADEAMYRAKAEGKNR 596
              +LR AD AMYRAK  GK+R
Sbjct: 693 PEDILRDADTAMYRAKEMGKSR 714