Pairwise Alignments

Query, 538 a.a., flagellar M-ring protein FliF (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 252 a.a., type III secretion inner membrane ring lipoprotein SctJ from Paraburkholderia sabiae LMG 24235

 Score = 64.7 bits (156), Expect = 4e-15
 Identities = 59/174 (33%), Positives = 87/174 (50%), Gaps = 26/174 (14%)

Query: 53  LYSNLAGEDANRV-VKLLQANKVPYKLENDGGTVLVPADKLYDLRIKVAGEGNLVG---- 107
           LY+ LA ED N + V LL+      K   DGG       K Y L++    +G++V     
Sbjct: 18  LYTGLAEEDVNEMTVALLERGVSAEKSTPDGG-------KTYTLQVD---DGDMVRAMQV 67

Query: 108 ---QGIGFEIFDDL-----KVG--QTDFVQKINYQRALQGELIRTISEFPGVETARVHLV 157
              +G+    FDDL     K G   T   +++ +   L  EL  T+S   GV  ARV +V
Sbjct: 68  LREKGLPHSKFDDLGSLFKKDGLVSTPTEERVRFIYGLSQELSGTLSHIDGVLVARVQIV 127

Query: 158 IPHRSLFIEEQQKPSASVVVKLREGKKMEAQDVQAIVNLVVMAVEGMDRNRVSV 211
           IP+     +  +  SA+V +K R G +++A  V  I NLVV +VEG+  ++VSV
Sbjct: 128 IPNNDPLAQTIKPSSAAVFIKYRPGLELDAL-VPQIKNLVVHSVEGLSYDQVSV 180