Pairwise Alignments

Query, 306 a.a., transcriptional regulator, LysR family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 284 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  157 bits (398), Expect = 2e-43
 Identities = 106/303 (34%), Positives = 152/303 (50%), Gaps = 27/303 (8%)

Query: 4   SWEQVEAFVRAARLGSFSAAARELGKAQSAVSTAIANLEADLGVNLFDRAGHLPVLTPEG 63
           S E ++AFV+AA  GSFSAAAR+LGK+QS VS A+A+LE DL V LFDR+   P LTP G
Sbjct: 3   SHEVLQAFVQAATQGSFSAAARKLGKSQSTVSAAVASLEIDLDVVLFDRSSRKPTLTPAG 62

Query: 64  EALLGDAERLLARGERFGSRAATLATGVEPRLVLAVDELAWGPALVDRLTGFAERWPDVE 123
             LL  AE++L    R    A+ LA G+EP++ +A+ +          L  F +R+PD+E
Sbjct: 63  HVLLQRAEQVLEASSRLELAASQLAQGLEPKVTIAMSDTYQSERFELALKAFEQRYPDLE 122

Query: 124 MEFLFGIVGDIALMVAEGRAHMGIMVPLADPRGRRVYAEEAWRDAESRLAGLDYFPAGAV 183
           +E+L     D+  +V  GRA + ++        + VY  +  R   +    +  F     
Sbjct: 123 LEWLIAECEDLIALVQSGRAQIALI------EAQEVYPPDLTRSPVAERTEIALF----- 171

Query: 184 PALPVVAAGHPLAGRRAVSPDELEALRQLDITSRGGERPDALSGQVWRVDSYWALRDLVR 243
                VA  HPL     + P  L+  R+L + S         SG+VW   S+  L ++ +
Sbjct: 172 -----VAPTHPLTRVENIDPHALQQYRELRLASIISPNETRPSGRVWSAPSFLMLMEMAQ 226

Query: 244 AGLGWAYLPESLAASDLDAGRLVRLDLAPAGEVWRWPLYLVRDA----RRAPGPAARWLL 299
            G GWA LP  L     +A  LV L+      V  WP  +  DA    +  PGPA  W+L
Sbjct: 227 LGFGWAELPRWLVERFGNA-ELVELN------VRGWPRSVAVDALWSRQHPPGPAGSWML 279

Query: 300 EAL 302
             +
Sbjct: 280 SQM 282