Pairwise Alignments

Query, 306 a.a., transcriptional regulator, LysR family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 286 a.a., LysR family transcriptional regulator from Serratia liquefaciens MT49

 Score =  166 bits (421), Expect = 5e-46
 Identities = 116/310 (37%), Positives = 159/310 (51%), Gaps = 29/310 (9%)

Query: 1   MQYSWEQVEAFVRAARLGSFSAAARELGKAQSAVSTAIANLEADLGVNLFDRAGHLPVLT 60
           M+YS E + AFV AA LGSFSAAAR+L K+QS +STAIANLEADLG+ LFDR    PVLT
Sbjct: 1   MRYSPEALLAFVEAAALGSFSAAARKLRKSQSTISTAIANLEADLGLILFDRQARQPVLT 60

Query: 61  PEGEALLGDAERLLARGERFGSRAATLATGVEPRLVLAVDELAWGPALVDRL-TGFAERW 119
             G  +LG  + +LA  ER  + +  LA  +EPRL +   +  + P   DRL   F +R+
Sbjct: 61  AAGRKVLGHVQEILAASERLDALSIRLADNIEPRLSVVFSD-TYQPKHHDRLMQQFEQRY 119

Query: 120 PDVEMEFLFGIVGDIALMVAEGRAHMGIMVPLADPRGRRVYAEEAWRDAESRLAGLDYFP 179
            D+E+E++    GD+  ++  GRAH+G++           +A    R  E    GL    
Sbjct: 120 QDIELEWMIAEEGDVIDLLQIGRAHLGMVEVQKQYPPDIAFA----RLPEQTEMGL---- 171

Query: 180 AGAVPALPVVAAGHPLAGRRAVSPDELEALRQLDITSRGGERPDALSGQVWRVDSYWALR 239
                    VA  HP+A   + +P++L + RQL + +  G       G VW   SY  L 
Sbjct: 172 --------FVAHSHPMAQTASPTPEQLSSTRQLILNTYTGAETARSGGLVWSAPSYLLLL 223

Query: 240 DLVRAGLGWAYLPESLAASDLDAGRLVRLDLAPAGEVWRWPLYLVRDA----RRAPGPAA 295
           ++   G GWA LP  L       G     +L P G    WP  +  DA       PGPA 
Sbjct: 224 EMAEQGFGWAVLPRWLVQ---QYGHNRLTELRPRG----WPKLISVDAVWSKLTPPGPAG 276

Query: 296 RWLLEALAKA 305
            W+LE L ++
Sbjct: 277 YWMLERLLES 286