Pairwise Alignments

Query, 657 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 796 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  101 bits (251), Expect = 2e-25
 Identities = 120/476 (25%), Positives = 198/476 (41%), Gaps = 54/476 (11%)

Query: 203 ERLGHKVGQPSWEVYKGREGSGNGCPVWKVIETGEGQRSNEILIDKHGQEIPVIVHTAPI 262
           +RL   +G+   E+  GR    N   V+ ++   E +R+   L  + G+    +V  + +
Sbjct: 210 QRLAEWLGKAGDEIL-GR----NLAEVFGIVPNPEEERAELRLRGRSGEVFQALVAHS-V 263

Query: 263 LDNDGEIEMVLEISVDVSKVRRLQDELRITRERYRQLFDEAPCYIAVIDRSLKVVDANRR 322
            D  GE+     +  D+   ++ +  LR    R+R LFD+AP  IA++D    V   N  
Sbjct: 264 FDEGGEMFTRSVVVRDLVPEQQWEKALRAAERRFRWLFDDAPVGIALVDLDGAVGACNLA 323

Query: 323 FHHDFG----EPAARHCHDIFAHRLAACQGCPVERSFDDGKPHQYETVVTTGDGRQANVL 378
                G    +   R   D+ A          + +      P  +  V   G  R     
Sbjct: 324 LQAMLGIDRDDMIGRPVIDVVAEENRPAASEQLGKVIAGSTPGTHLEVRLKGR-RNLIAQ 382

Query: 379 VWTSPLRDAAGNITEVMEMSTDITQVRQLQDRLSQ------LGLLLGSTAHGIKGLLTAL 432
           ++ SP  +  G+I+ ++    D T+ R L+ + +Q      +G L G  AH    LLTA+
Sbjct: 383 LFVSPSHED-GDISGLVIHFIDATEQRNLEMQFAQSQKMQAMGQLAGGVAHDFNNLLTAM 441

Query: 433 DGG----VYRLGSGLDRNDEARVRDSFEDIRHL---TGRLRKMVLDILYYAKKRDLNWEV 485
            G     + R G+G           SF DI  +     R   +V  +L +++++ L   +
Sbjct: 442 IGFCDLLLQRHGAG---------DPSFADIMQVKQNANRAASLVRQLLAFSRRQALQPRL 492

Query: 486 VVAERFATETAELIEGKAVNRGVGFQLEIAAESGTFEADAGALSAALVNLLENAVEAC-- 543
           +       E + L+  + +   +  ++      G    D G     ++NL  NA +A   
Sbjct: 493 LNVTDALAELSNLLR-RLLGETIELRMIHGRALGLVRVDPGQFDQVIINLAVNARDAMPG 551

Query: 544 ---------AAERSRP-EHSVTFSVGGDANHVEFSVRDDGVGMDRETREKLFTLFFSSKG 593
                    A    +P +        GD  +V+  V D G G+ +E   ++F  FFS+K 
Sbjct: 552 GGALTIRTNAVHVDQPIQRGPELMPAGD--YVQIEVADTGTGIGKENLARIFEPFFSTKE 609

Query: 594 -SAGTGIGLFVANQVVQQHGGHIAVASEPGHGTTFTVSLPRRLPDVA----RCPAP 644
             AGTG+GL     +V+Q  G I V SEPG G TF++ LPR   D A    R P P
Sbjct: 610 VGAGTGLGLSTVYGIVRQTDGFIFVESEPGQGATFSIYLPRIDADPAAETKRAPLP 665



 Score = 57.8 bits (138), Expect = 2e-12
 Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 3/107 (2%)

Query: 2   SESILLVDDEEGIRKVLGITLADAGYRVTTAADGEEAMRRFAEERP-DIVLTDIKMPGMS 60
           S +ILLV+DE+ +R      L + GY V  A  GE+AM       P  ++++D+ MPGM 
Sbjct: 676 SGTILLVEDEDAVRLFGARALRNKGYTVIEARSGEQAMEVLNGGEPIQVLISDVVMPGMD 735

Query: 61  GLELLESIKSRDSEVEVIMLTGHGDMELAIQSLKRDA-TDFITKPIN 106
           G+ L   ++     ++VI+++G+ + ++A   +  DA   F+ KP +
Sbjct: 736 GVTLARFVRMERPAIKVILISGYSE-DVARDGIDPDAGIHFLPKPFS 781