Pairwise Alignments

Query, 1121 a.a., ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 744 a.a., DEAD/DEAH box helicase from Paraburkholderia sabiae LMG 24235

 Score =  122 bits (306), Expect = 1e-31
 Identities = 156/568 (27%), Positives = 231/568 (40%), Gaps = 92/568 (16%)

Query: 127 RQGIADLYSHQARATD-IIRAGRDVVVATPTASGKTFIYNLPVLEQFLRDP--DARAIYL 183
           R+G  +L   Q RA   +I A RDV++A  TA+GKT    LP+L   LRD       +Y+
Sbjct: 27  REGWTELRDAQERAVPALIDADRDVIIAAATAAGKTEAAFLPILSNLLRDEPCSGSVLYV 86

Query: 184 FPLKALAQDQLATFNALTAHWPRDARPAAAIYDGDTTDHFRRKIRNAPPPVLLTNPEMLH 243
            PLKAL  DQ +  + L         P    + GD +   +++    P  VLL  PE L 
Sbjct: 87  SPLKALINDQWSRLDNLCE---AQEIPVTG-WHGDVSSGRKQRFVKKPTGVLLITPESLE 142

Query: 244 LALLPHHEQWASLFASLTHVVVDEVHTYRGV-LGAHMAQVFRRLRRVCERYGAQPSFVFC 302
              +      A+ F +L +VVVDE+H + G   G  +  + +R+  VC   G +   V  
Sbjct: 143 AMFVTRGASLATTFGALRYVVVDELHAFIGSERGMQLQSLMQRVDHVC---GRRVPRVGL 199

Query: 303 SATVGNPGELAHNLT--GLTPEVVTESGAPQGKRHFIFLDPEESPA-------------- 346
           SAT+G+    A  L   G     + ESG    +   +     E P               
Sbjct: 200 SATLGDMRLAAEFLRPKGAQDVQIVESGNTGQELKILIKGYVEKPPRIQFEPGIENPGLE 259

Query: 347 ----TAAIQLLRSALK--RGLRTIVYCQSRRMTELVS---LWAAEKSGPYRDRISAYRAG 397
                + +++     K  RG   +++  SRR  EL +     A E+ G Y +    +   
Sbjct: 260 DVVPASTVEVANHMYKVLRGSNNLIFPNSRRQVELYADLLRRACERDG-YPNEFWPHHGS 318

Query: 398 FLPEERRDVEARMASGQLLA-VITTSALELGIDIGSLDLCILVGYPGTVMSTLQRGGRVG 456
              E R   E  +  G   A  + T+ LELGIDIG++   + VG P +V S  QR GR G
Sbjct: 319 LSKELREQTEQALKKGDRPASAVCTTTLELGIDIGAVKSVVQVGAPPSVASLRQRLGRSG 378

Query: 457 RARQESAVV--------LVAGEDALDQYFMRHP----------------EDFFARGAEHA 492
           R + E+A++        L +G D  D+  +R                  E   A G   +
Sbjct: 379 RRKGEAAILRSYCVEAELHSGSDLSDR--LRESLVQSVAMVNLLLRGWFEPPRAGGMHPS 436

Query: 493 VLNPDNPVILARHLECAAAEI--------PLSAAD-----PWLASPGASEAVQRLEREGL 539
            L      I+A      A E+        P  A D       L S G+ + + + E  GL
Sbjct: 437 TLVQQILSIIAERGGARANELWDTLVVQGPFGAIDKPTFAAILRSLGSKDLIVQ-EASGL 495

Query: 540 LLRSADGSTLLASRKRPQRHVDLRGSGST---YTIEDGEGHIIGSVDGHRALRETHPGAV 596
           LL    G  L+        H +   S ST   + I  G   ++GSV   R L    PG  
Sbjct: 496 LLHGVAGERLV-------NHYEFYASFSTDDEFRIVAG-AKVLGSVPVSRPLA---PGQG 544

Query: 597 YLHRGRTWVVQQLDPGARKVMASPARVG 624
            +  G+ W VQ++D   + V   P + G
Sbjct: 545 LVFGGQRWRVQEVDAPRKTVYVKPDQGG 572