Pairwise Alignments

Query, 1121 a.a., ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 804 a.a., ligase-associated DNA damage response DEXH box helicase from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 97.8 bits (242), Expect = 3e-24
 Identities = 105/343 (30%), Positives = 143/343 (41%), Gaps = 33/343 (9%)

Query: 146 AGRDVVVATPTASGKTFIYNLPVLEQFL-RDPD--------ARAIYLFPLKALAQDQLAT 196
           AG   ++  PT  GKT    LP L     R P            +YL PLKAL  D    
Sbjct: 7   AGHHALLVAPTGGGKTLAGFLPSLIDLAERGPKPTTGPGSGVHTLYLSPLKALTTD--VE 64

Query: 197 FNALTAHWPRDARPAAAIYDGDTTDHFRRKIRNAPPPVLLTNPEMLHLALLPHHEQWASL 256
            N +T               GDT    R++ R+ PP +LLT PE L  AL    E   S 
Sbjct: 65  RNLMTPIREIGLNIHVETRTGDTKQSKRQRQRDFPPDILLTTPEQL--ALFCAWEGARSY 122

Query: 257 FASLTHVVVDEVHT-YRGVLGAHMAQVFRRLRRVCERYGAQPSFVFCSATVGNPGELAHN 315
           FA L  VV+DEVH  + G  G  ++    RL    + +      V  SAT+ +P +L   
Sbjct: 123 FADLKCVVLDEVHAIWSGKRGDLLSLGLGRL----QSFAPDMRRVGLSATIEDP-DLIRG 177

Query: 316 LTGLTP---EVVTESGAPQGKRHFIFLDPEESPATA------AIQLLRSALKRGLRTIVY 366
               +P   +V    G P        L  E     A      AI  + +A++R    +++
Sbjct: 178 WLSPSPRVKDVTLVRGDPGAPAVIEVLISEGKVPWAGHTGQHAIPEVYAAIQRSTLALIF 237

Query: 367 CQSRRMTELV--SLWAAEKSGPYRDRISAYRAGFLPEERRDVEARMASGQLLAVITTSAL 424
             +R  +E V   LWA          I  +      E+RR +EA MA G L AV+ TS L
Sbjct: 238 VNTRWQSEFVFQQLWAINDENL---PIGLHHGSLAAEQRRKIEAAMARGDLRAVVCTSTL 294

Query: 425 ELGIDIGSLDLCILVGYPGTVMSTLQRGGRVGRARQESAVVLV 467
           +LGID G +DL I +  P      +QR GR      E +  L+
Sbjct: 295 DLGIDWGDVDLVIQMAAPKGSSRLVQRIGRANHRLDEPSRALL 337