Pairwise Alignments

Query, 439 a.a., minor capsid protein C, degenerate (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 326 a.a., Periplasmic serine (ClpP class) from Pseudomonas sp. S08-1

 Score = 64.3 bits (155), Expect = 5e-15
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 5/153 (3%)

Query: 99  DQIRPAIAAALADRGVRAILLDVASPGGTVAGMKELADYIGAERAKGTKP---MAAYANG 155
           D I  ++ AA  D+  + I+L + SPGG+      + D I  +R +G  P   + A  + 
Sbjct: 92  DNIVSSLRAAFEDKKTKGIVLRINSPGGSPVQSGYIYDEI--KRLRGEHPDTKVYAVISD 149

Query: 156 LMASAAYMIGSATGRVLAPATATVGSIGVISVYEDWSKWNEKAGLSYAYLTAGQWKAVGN 215
           L AS AY I SA  ++ A   + VGSIGV +    +    EK G+     T+G+ KA  +
Sbjct: 150 LGASGAYYIASAADQIYADKASLVGSIGVTAATFGFVGVMEKVGVDRRVYTSGEHKAFLD 209

Query: 216 PDTPLADNERAYLQERLTALYRHFTDGVSASMG 248
           P  P    E  + Q  L   ++ F + V    G
Sbjct: 210 PFQPPKAEETRFWQSVLETTHKQFIESVKKGRG 242