Pairwise Alignments

Query, 439 a.a., minor capsid protein C, degenerate (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 329 a.a., hypothetical protein from Pseudomonas sp. RS175

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 56/178 (31%), Positives = 82/178 (46%), Gaps = 12/178 (6%)

Query: 73  AVIPVMGMLTPRRSWSWGYGYTTGMLDQIRPAIAAALADRGVRAILLDVASPGGTVAGMK 132
           AVI V GM+  + + S          D I  ++ AA  D  V+ ++L + SPGG+     
Sbjct: 78  AVIDVEGMIADKEAAS---------ADNIIGSLRAAFEDEKVKGVVLRINSPGGSPVQSG 128

Query: 133 ELADYIGAERAK--GTKPMAAYANGLMASAAYMIGSATGRVLAPATATVGSIGVISVYED 190
            + D I   RA    TK  A  A+ L AS AY I SA  ++ A   + VGSIGV +    
Sbjct: 129 YVYDEIVRLRAAHPDTKVYAVIAD-LGASGAYYIASAADQIYADKASLVGSIGVTAAGYG 187

Query: 191 WSKWNEKAGLSYAYLTAGQWKAVGNPDTPLADNERAYLQERLTALYRHFTDGVSASMG 248
           + +  +K G+     TAG+ K+  +P  P    E A+ Q  L   ++ F   V    G
Sbjct: 188 FVETLDKLGIERRVYTAGEHKSFLDPFQPQKPEEIAFWQGVLDTTHKQFIASVKKGRG 245