Pairwise Alignments

Query, 439 a.a., minor capsid protein C, degenerate (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 285 a.a., S49 family peptidase from Erwinia tracheiphila SCR3

 Score =  127 bits (319), Expect = 4e-34
 Identities = 88/228 (38%), Positives = 123/228 (53%), Gaps = 4/228 (1%)

Query: 62  EERPYELCDGVAVIPVMGMLTPRRSWSWGYGYTTGMLDQIRPAIAAALADRGVRAILLDV 121
           E+  Y+  +G+AVIPV G L  +      Y   TG  D IR A  +ALAD  V+AI LD+
Sbjct: 58  EDCGYDNLEGIAVIPVHGTLVQKLGSLRPYSGMTGY-DGIRHAYLSALADPDVKAICLDI 116

Query: 122 ASPGGTVAGMKELADYIGAERAKGTKPMAAYANGLMASAAYMIGSATGRVLAPATATVGS 181
            SPGG VAG  +L D I   +A+G KP+ A       SAAY I SA  R++ P T  VGS
Sbjct: 117 DSPGGEVAGCFDLVDEI--YQARGVKPVHAILTECAYSAAYAIASAADRIVVPRTGGVGS 174

Query: 182 IGVISVYEDWSKWNEKAGLSYAYLTAGQWKAVGNPDTPLADNERAYLQERLTALYRHFTD 241
           IGVI ++ DWS+  +  GL    +T G  KA  NP  PL+D  RA LQ+ + A+ + F +
Sbjct: 175 IGVIVMHVDWSQKIKSDGLQVTIITYGDRKAETNPYVPLSDVARASLQDEVDAMGKLFVE 234

Query: 242 GVSASMGLDAANLTTWADGKVFVASEAPQGLVTAIVADREAAIATLAK 289
            V+ + G+   ++        F+A +  +  +   VA  +AA   L K
Sbjct: 235 TVARNRGI-TDDIIRKTQAACFMAPDGVRLGLADSVAAPDAAFNELMK 281