Pairwise Alignments

Query, 439 a.a., minor capsid protein C, degenerate (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 439 a.a., capsid assembly protein from Escherichia coli ECRC100

 Score =  112 bits (281), Expect = 2e-29
 Identities = 96/322 (29%), Positives = 142/322 (44%), Gaps = 29/322 (9%)

Query: 51  ERAATFGVSGGEERP-----YELCDGVAVIPVMGMLTPRRSWSWGYGYTTGMLDQIRPAI 105
           E  A   +SG ++ P     Y++ +G+AV+PV G L  R      Y   TG  + I   +
Sbjct: 56  EAPAALALSGDDDGPRQARSYQVMNGIAVLPVSGTLVSRTRALQPYSGMTGY-NGIIARL 114

Query: 106 AAALADRGVRAILLDVASPGGTVAGMKELADYIGAERAKGTKPMAAYANGLMASAAYMIG 165
             A +D  V  ILLD+ +PGG VAG  + AD I   R +  KP+ A AN +  SA  ++ 
Sbjct: 115 QQAASDPMVDGILLDMDTPGGMVAGAFDCADIIA--RVRDIKPVWALANDMNCSAGQLLA 172

Query: 166 SATGRVLAPATATVGSIGVISVYEDWSKWNEKAGLSYAYLTAGQWKAVGNPDTPLADNER 225
           SA  R L   TA  GSIGV+  + ++    EK G+    + +G  K  GNP + L  + R
Sbjct: 173 SAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPGDVR 232

Query: 226 AYLQERLTALYRHFTDGVSASMGLDAANLTTWADGKVFVASEAPQGLVTAIVADREAAIA 285
             LQ R+ A  R F   VSA  GL                 +A      A+ + +EA  A
Sbjct: 233 ETLQSRMDATRRMFAQKVSAYTGLSV---------------QAVLDTEAAVYSGQEAIDA 277

Query: 286 TLAKEMTMDRANLASQHPELLASIEREAAEKAVAAARTQFEEKATTGLGDKQQACLAAVR 345
            LA E+      +      L      +A +  ++  R   E ++TT      QA +  V 
Sbjct: 278 GLADELVNSTDAITVMRDAL------DARKSRLSGGRMTKETQSTTVSATASQADVTGVV 331

Query: 346 AVAGDEAASRVQALLEQNLSAS 367
                E AS  Q  +   ++A+
Sbjct: 332 PATEGENASAAQPDVNAQITAA 353