Pairwise Alignments

Query, 439 a.a., minor capsid protein C, degenerate (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 501 a.a., hypothetical protein from Escherichia fergusonii Becca

 Score =  105 bits (262), Expect = 3e-27
 Identities = 101/363 (27%), Positives = 155/363 (42%), Gaps = 19/363 (5%)

Query: 58  VSGGEE--RPYELCDGVAVIPVMGMLTPRRSWSWGYGYTTGMLDQIRPAIAAALADRGVR 115
           ++GG+   R Y + +G+AV+PV G L  R      +   TG  D I   +  A+AD  VR
Sbjct: 62  MAGGKRPARVYRVVNGIAVLPVTGTLVHRLGGMRPFSGMTGY-DGIVACLQQAMADSQVR 120

Query: 116 AILLDVASPGGTVAGMKELADYIGAERAKGTKPMAAYANGLMASAAYMIGSATGRVLAPA 175
            +LLD+ SPGG  AG  + AD I   R +  KP+ A  N    SAA ++ SA  R L   
Sbjct: 121 GVLLDIDSPGGQAAGAFDCADMI--YRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQ 178

Query: 176 TATVGSIGVISVYEDWSKWNEKAGLSYAYLTAGQWKAVGNPDTPLADNERAYLQERLTAL 235
           T+ +GSIGV+  +  ++    +AG+    + +G  K  GN    L    R  +Q+R+ A 
Sbjct: 179 TSRIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAA 238

Query: 236 YRHFTDGVSASMGLDAANLTTWADGKVFVASEAPQGLVTAIVADREAAIATLAKEMTMDR 295
            R F + V+   GL + +  T  +  VF   E   G+   +  +   A   ++   T   
Sbjct: 239 RRMFAEKVAMYTGL-SVDAVTGTEAAVF---EGQSGIEAGLADELINASDAISVMATALN 294

Query: 296 ANLASQHPELLASIEREAAEK-----AVAAARTQFEEKATTGLGDKQQACLAAVRAVAGD 350
           +N+       L + E  A E       +     +  E+  T L  +Q   +   RA+   
Sbjct: 295 SNVRGGTMPQLTATEAAAQENQRVMGILTCQEAKGREQLATMLAGQQGMSVEQARAILA- 353

Query: 351 EAASRVQALLEQNLSASQIEAVASLLPKPAAQATTEAQPRHEEPSASHEERILAGIVGAH 410
            AA+  Q +      A +I        +    AT  A P   E +      ILA    A 
Sbjct: 354 -AAAPQQPVASTQSEADRIMVCEEANGREQLAATLAAMP---EMTVEKARPILAASPQAD 409

Query: 411 AAP 413
           A P
Sbjct: 410 AGP 412