Pairwise Alignments

Query, 325 a.a., oligopeptide/dipeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 324 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  264 bits (675), Expect = 2e-75
 Identities = 132/323 (40%), Positives = 209/323 (64%), Gaps = 1/323 (0%)

Query: 1   MFAFIIRRVAQALLVMFIISLLGFAIKYSFGDPTREMMGVSVSVKEREALREELGLNDPF 60
           M  F++ R  Q L+ + ++S+L FA  Y  G+P   ++G + +  EREA+    GL+   
Sbjct: 1   MARFLLSRFLQTLVTLAVMSVLVFAGVYLVGNPVDVLLGSNATPAEREAVIRAFGLDKTL 60

Query: 61  AVQWTRFASGALKGDLGISYFYRKPALDVILDKAPATLELVFVAACLIILISVPVGVYAA 120
             Q+  F + AL+GDLG S+ + +PAL +IL + PATLEL   A  L +LI +P+GV+A 
Sbjct: 61  WQQYLLFVTHALQGDLGNSFIFNQPALHLILQRMPATLELALAAFLLSLLIGIPLGVFAG 120

Query: 121 CRPKDVLSRLFMGVSTIGVSVPVFLTAIFLIYIFSVNLGWLPSFGRGNPEHVIGSWDTNL 180
            RP  + ++  M +S +G S+P F   + +I +FSV LGWLPS GRG+   V G    +L
Sbjct: 121 LRPDSLAAKSVMTLSILGFSLPTFWIGMMMIMLFSVKLGWLPSSGRGDTVTVAGV-PLSL 179

Query: 181 TTWANFKHIILPGISLSSIMLPLFIRLIRAEMKEVLETEYVKFARAKGLKTWRVIMVHAF 240
            T   ++H++LP ++L+   + L IRL RA ++E L+ +YV+FARAKGL   R++ VH  
Sbjct: 180 LTADGWRHLLLPALNLALFKISLIIRLTRAGVRECLQQDYVRFARAKGLSERRILFVHVL 239

Query: 241 KNTLLPVITVGGVQLGTMIAFTILTETVFQWQGMGFMFIDAVERADTSLLVAYLIFCGAI 300
           KNTL+P+ITV G++LG +IAF ++TET++ W GMG + ID++   D  +++AYL+    +
Sbjct: 240 KNTLIPLITVIGLELGALIAFAVVTETIYAWPGMGKLIIDSIAVLDRPVILAYLMMTVVM 299

Query: 301 FVTVNTVVDIVYGLVNPMVRIAG 323
           F  +N +VD++Y +V+P +R+ G
Sbjct: 300 FSLINLLVDVLYAVVDPRIRLGG 322