Pairwise Alignments

Query, 325 a.a., oligopeptide/dipeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 322 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  279 bits (713), Expect = 8e-80
 Identities = 143/322 (44%), Positives = 206/322 (63%), Gaps = 1/322 (0%)

Query: 1   MFAFIIRRVAQALLVMFIISLLGFAIKYSFGDPTREMMGVSVSVKEREALREELGLNDPF 60
           M  FII+R+  A+LVM  ++L+ F I    GDP   M+G   S ++R ALRE LGLND  
Sbjct: 1   MLVFIIKRLGNAVLVMLSVALIAFLIFRLAGDPVELMVGEQTSQEDRAALRERLGLNDSL 60

Query: 61  AVQWTRFASGALKGDLGISYFYRKPALDVILDKAPATLELVFVAACLIILISVPVGVYAA 120
             Q+ RF   A +G+ G+SY   +  L +I ++ PATLELV VA  + +++ +P+GV  A
Sbjct: 61  PTQYLRFVKDAAQGNFGVSYRNGQQVLPLIAERFPATLELVLVATVISLVVGLPLGVLTA 120

Query: 121 CRPKDVLSRLFMGVSTIGVSVPVFLTAIFLIYIFSVNLGWLPSFGRGNPEHVIGSWDTNL 180
            R     +     +S +GVS+P F+  I LI +FSV+LGW P+FGRG+    +G W T L
Sbjct: 121 IRRGKWYTEGLQFLSIVGVSLPSFVVGILLILVFSVSLGWAPAFGRGDVVQ-LGWWSTGL 179

Query: 181 TTWANFKHIILPGISLSSIMLPLFIRLIRAEMKEVLETEYVKFARAKGLKTWRVIMVHAF 240
            T +    +ILP I+LS   + L +RL+RAEM EVL +++VKFARA+G+  WR+   HA 
Sbjct: 180 LTSSGRAALILPAIALSLYQITLVMRLVRAEMLEVLRSDFVKFARARGIPRWRIYFRHAL 239

Query: 241 KNTLLPVITVGGVQLGTMIAFTILTETVFQWQGMGFMFIDAVERADTSLLVAYLIFCGAI 300
           +N L+PV+T+  + +G++IAF ++TETVFQW GMG +FI AV   D  ++ AYL     I
Sbjct: 240 RNCLMPVVTLTTMNVGSLIAFALITETVFQWPGMGMLFIQAVTFLDIPVMAAYLCIISFI 299

Query: 301 FVTVNTVVDIVYGLVNPMVRIA 322
           FV +NT VDI Y +++P +R A
Sbjct: 300 FVVLNTFVDIAYAVIDPRLRTA 321