Pairwise Alignments

Query, 306 a.a., oligopeptide/dipeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 299 a.a., ABC transporter permease subunit from Dickeya dianthicola ME23

 Score =  194 bits (493), Expect = 2e-54
 Identities = 112/294 (38%), Positives = 172/294 (58%), Gaps = 25/294 (8%)

Query: 13  FLYSFLRDPVAVGSFALLFILAVSAILAPLIAPHSPYDGATLDIMNAELPPAWKPEG--- 69
           FL++F+R+P+A+ S   + +L + A+ AP +AP +P +            P W   G   
Sbjct: 26  FLHAFIRNPMALASGGFVLLLVLVAVFAPWLAPWNPME------------PDWAALGEAP 73

Query: 70  TADFLLGTDNQGRDILSAMLYGMRVSLVIGLGAVALQSVIGIFVGLVSGYGSKRIDSILM 129
           +A   +G D+ GRD++S ++YG R+SL IG+ +V L  + GI +GL++GY  + ID ++M
Sbjct: 74  SASHWMGADDLGRDVMSRIIYGARISLYIGVVSVTLGMLAGIVLGLLAGYYGRGIDMLIM 133

Query: 130 RVADVQLSFSSYMVAIFFGAILQMVVGVGRYEEVAVPFLIFVIGLSEWPQIARTVRASVL 189
           R  DV  +F   ++AI   AIL    G G    V +   +F +     P  AR VRAS L
Sbjct: 134 RGCDVLFAFPGMLLAIAVVAIL----GPG-LNNVIIAVAVFSV-----PVFARIVRASTL 183

Query: 190 AEKKKEYVEAARVIGLPARRIMLRHILPNTLTPVLVISTVQVANAVMSEAALSFLGLGMP 249
           + K+  YVEA R  G P R I+LRHILP TL+ V+V  T+++  ++++ A LSF+GLG  
Sbjct: 184 SLKQAAYVEAVRCAGAPDRVILLRHILPGTLSNVIVYFTMRIGTSILTAAGLSFIGLGPE 243

Query: 250 VTQPSLGSLIKSGFQYFFSGSWWITLFPGIMLILLVLSINLLGDWLRDFLNPKL 303
              P  G+++        +G W +++FPG+ +   VL+ NLLGD LRD L+PKL
Sbjct: 244 PDVPEWGNILAMSRSMMMAGQWHVSVFPGLAIFCTVLAFNLLGDALRDTLDPKL 297