Pairwise Alignments

Query, 306 a.a., oligopeptide/dipeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 306 a.a., ABC transporter permease from Dickeya dadantii 3937

 Score =  253 bits (645), Expect = 5e-72
 Identities = 135/290 (46%), Positives = 197/290 (67%), Gaps = 12/290 (4%)

Query: 14  LYSFLRDPVA-VGSFALLFILAVSAILAPLIAPHSPYDGATLDIMNAELPPAWKPEGTAD 72
           L   L D +A +G F L  I+ + A+LAP IA  +PYD   L IM+  LPP     G   
Sbjct: 25  LSMLLHDRLARLGLFTLALIVGL-ALLAPWIALQNPYDLTQLMIMDNRLPPGSAGMGGLT 83

Query: 73  FLLGTDNQGRDILSAMLYGMRVSLVIGLGAVALQSVIGIFVGLVSGYGSKRIDSILMRVA 132
           + LG+D+QGRD+LSA+LYG R SL++G+ +     VIG+ VG++S +   R D++LMR+ 
Sbjct: 84  YWLGSDDQGRDLLSAILYGTRTSLLVGVSSALAALVIGMTVGMLSAWLGGRTDALLMRIV 143

Query: 133 DVQLSFSSYMVAIFFGAILQMVVGVGRYEEVAVPFLIFVIGLSEWPQIARTVRASVLAEK 192
           D+QLSF   ++A+    IL  V+G G      V  +I  + +++W   ART+RAS L E 
Sbjct: 144 DIQLSFPPILIAL----ILLSVLGQG------VDKIILALVITQWAYYARTIRASALLES 193

Query: 193 KKEYVEAARVIGLPARRIMLRHILPNTLTPVLVISTVQVANAVMSEAALSFLGLGMPVTQ 252
           ++ YV+AAR +   A RI+ RH+LPN L P++V++T+++A A+M EA LSFLG+G+P+T+
Sbjct: 194 RRNYVDAARGMAFSAPRILFRHMLPNCLPPLIVVATMRIAYAIMLEATLSFLGIGLPITE 253

Query: 253 PSLGSLIKSGFQYFFSGSWWITLFPGIMLILLVLSINLLGDWLRDFLNPK 302
           PSLG LI +GF Y  SG +WI+LFPG+ML+LL+++INL+GD LRD LN +
Sbjct: 254 PSLGLLIANGFDYLLSGDYWISLFPGVMLLLLIVAINLIGDALRDALNTR 303