Pairwise Alignments

Query, 306 a.a., oligopeptide/dipeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 295 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

 Score =  269 bits (687), Expect = 7e-77
 Identities = 134/290 (46%), Positives = 196/290 (67%), Gaps = 10/290 (3%)

Query: 13  FLYSFLRDPVAVGSFALLFILAVSAILAPLIAPHSPYDGATLDIMNAELPPAWKPEGTAD 72
           F+  F R P+AV   AL+F++ + A+ AP ++P +PYD   LDIM+  + P  +      
Sbjct: 12  FMRQFARSPLAVMGLALIFLIVLMAVFAPYLSPQNPYDLMQLDIMDGRMAPGTESSTGFT 71

Query: 73  FLLGTDNQGRDILSAMLYGMRVSLVIGLGAVALQSVIGIFVGLVSGYGSKRIDSILMRVA 132
           FL G+D+QGRD+LSA+LYG+R+SL++GLG+ AL  +IG   GL + Y   R+++ +MR+ 
Sbjct: 72  FLFGSDDQGRDMLSAILYGLRISLIVGLGSAALAFIIGTAFGLTAAYVGGRVETAMMRLV 131

Query: 133 DVQLSFSSYMVAIFFGAILQMVVGVGRYEEVAVPFLIFVIGLSEWPQIARTVRASVLAEK 192
           D+QLSF + + A+   A+L   VG           ++F I L EW   ART R + L E 
Sbjct: 132 DLQLSFPTILSALLILALLGKSVGN----------VVFAIVLVEWATYARTARGAALTEL 181

Query: 193 KKEYVEAARVIGLPARRIMLRHILPNTLTPVLVISTVQVANAVMSEAALSFLGLGMPVTQ 252
           ++EYVEAAR + LP R I+ R +LPN L+P++V+ T+QVA A+  EA LSFLGLG+PVT+
Sbjct: 182 RREYVEAARSLRLPHRNILFRQLLPNCLSPLVVLLTMQVARAITLEATLSFLGLGVPVTE 241

Query: 253 PSLGSLIKSGFQYFFSGSWWITLFPGIMLILLVLSINLLGDWLRDFLNPK 302
           PSLG LI SG+++  SG++WI LFPGI L++ + +INL+GD LR  ++PK
Sbjct: 242 PSLGLLISSGYEFILSGTYWIALFPGIALLVTIFAINLVGDRLRQLVDPK 291