Pairwise Alignments

Query, 474 a.a., deoxyribodipyrimidine photolyase, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 480 a.a., deoxyribodipyrimidine photolyase from Pseudomonas putida KT2440

 Score = 49.7 bits (117), Expect = 2e-10
 Identities = 58/213 (27%), Positives = 87/213 (40%), Gaps = 25/213 (11%)

Query: 213 RSVPALTGPDAPVPGEEGARRTLETFLTSRIHRYEKRND-PNADAVSGLSPYLHFGMMAA 271
           ++ PAL   D    GE  A+  L  FL   I  Y    D P     S LSPYL  G+++ 
Sbjct: 193 KTTPALR--DHWPAGEAEAQSRLSRFLDETIDDYHHLRDLPAKPGTSQLSPYLAAGVISP 250

Query: 272 QRVVQRVTASTAGSADARASFIEELV---VRRELADNFCLHTPDYDAVTCFPAWAQGTLD 328
           ++ +    A   G  D+ ++ ++  +   + RE   +     P       F A  +    
Sbjct: 251 RQCLHGALAGNRGEFDSGSTGVQTWINELLWREFYKHILSGYPQVSRHRAFRAQTEAL-- 308

Query: 329 RHRDDPRPHLYDEAALEKARTADPLWNAGQTQLMRCGVIHGYMR----MYWAKQLLL-WT 383
             RD P     D AA E+ RT  P+ +A   QL+  G +H  +R    M+ +K LL+ W 
Sbjct: 309 PWRDAPA----DLAAWEQGRTGFPIIDAAMRQLLHTGWMHNRLRMVVAMFLSKNLLIDW- 363

Query: 384 PTPEEAMRIAVRQNDRWALDGRDSNGYAGIAWS 416
                  R   R   R  +DG  +    G  WS
Sbjct: 364 -------RKGERHFMRHLIDGDLAANNGGWQWS 389