Pairwise Alignments

Query, 278 a.a., cation ABC transporter, permease protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 282 a.a., Manganese ABC transporter, inner membrane permease protein SitD from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  125 bits (315), Expect = 8e-34
 Identities = 88/270 (32%), Positives = 137/270 (50%), Gaps = 11/270 (4%)

Query: 5   PFDHAFMLHALAAGALAGVACSVAGVFAVLMRLTFIGVCLAHAAFAGGLLALAFGLPSLP 64
           PF   FM++AL    +  + C++  VF VL     +G  ++HA F G +LA   G+P   
Sbjct: 9   PFQFDFMVNALMVSVIVAIPCALLSVFLVLKGWALMGDAMSHAVFPGVVLAYIVGIPLAI 68

Query: 65  AALASSMVAALVVGPLADRGEISPDTAVGIVFSAMIGVAVLCMGLLPGPKTEALNLFWGS 124
            A  + +  A+  G L D   I  DT +GIVFS M G A L + +    +    ++ +G 
Sbjct: 69  GAFIAGLFCAIATGYLDDNSRIKRDTVMGIVFSGMFG-AGLVLYVSIQSEVHLDHILFGD 127

Query: 125 ILTVRPRDVWLLAAVA-GVAVVGVAVFFKEVQAVACHRSVAAAVGIPATAVFYAILLQTG 183
           +L V   D+   + +A G+A++ + + +K++   A     A A G+  T + Y +L    
Sbjct: 128 MLGVSLGDIVQTSVIALGIALI-IGLKWKDLLLHAFDPHQAKASGLNTTLLHYGLLCMIA 186

Query: 184 VTVTACLPSVGGLLVYSLLVSPAAAAYQLTYSLGRMFLLAMFFGALSGVGGVLVAWYLD- 242
           +T+ A L SVG +L  SLL++P A A  LT    R   LA+    ++   GV +++YLD 
Sbjct: 187 LTIVATLKSVGIILSISLLIAPGAIAILLTRRFARALGLAVSLSVITAFAGVYLSFYLDS 246

Query: 243 VPAGAAVVLFS---CALFLLAAWFSPKRDR 269
            PA   VVLF+    A F+ A W    RDR
Sbjct: 247 APAPTIVVLFAIVFIAAFIYATW----RDR 272