Pairwise Alignments

Query, 330 a.a., cation ABC transporter, periplasmic binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 290 a.a., metal ABC transporter substrate-binding protein from Pectobacterium carotovorum WPP14

 Score = 47.8 bits (112), Expect = 3e-10
 Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 14/172 (8%)

Query: 28  LMLSCFMMAPSEARAAERLMVLTGTTLIEDVVKDVGGARVETRTVIPGAACPGHYDMRAS 87
           L  +  ++A + A+AAE+L V+T  T+I+D+ +++ G      ++    A    Y     
Sbjct: 3   LPCALLLLASTSAQAAEKLKVITTFTIIQDIAQNIAGDAATVESITKPGAEIHDYQPTPR 62

Query: 88  DIAAFARADIIL-----LHDW----QRGQSHIKAMLATDAGAAGKVRVPEAPGN-----W 133
           DI     A ++L     L  W         ++ A++ T+      +R     GN     W
Sbjct: 63  DIVKTQSAQLVLWNGMNLERWFTRFFENVKNVPAVVVTEGITPLPIREGAYNGNPNPHAW 122

Query: 134 MLPQVQARGTAAVTALLAEADTAFAEDYARRGGERVARIGAVGEEVREAVKR 185
           M P         +   L +AD A AE Y R       +I A+   +RE + R
Sbjct: 123 MSPSNALIYIENIRKGLVQADPANAETYNRNAKAYAEKIKALDAPLRERLAR 174