Pairwise Alignments

Query, 530 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 365 a.a., dTDP-L-rhamnose 4-epimerase from Xanthobacter sp. DMC5

 Score = 44.7 bits (104), Expect = 6e-09
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)

Query: 11 VCVTGATGYVGGRLVPRLLDHGWRVRALVRTPAKLLCRPWARHPR-LDIIRGDLDDACSL 69
          V +TG  G++G  +   L+  G RVR       ++  RP A  P+ ++++ GD+ DA ++
Sbjct: 4  VLITGGAGFIGAHVARALVARGTRVRVFDALIEQVHARPAAMLPQEVELVVGDIRDADAV 63

Query: 70 VPALEGCDAVFYL 82
            AL G DAV +L
Sbjct: 64 GAALRGVDAVIHL 76



 Score = 29.3 bits (64), Expect = 3e-04
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 195 IAISNVLGYLEGCLDHPETMGQTYDIG-GPDILSYRELFDIFAEVAQLRRRTIIP 248
           + +S+V       L+HP  +G+ Y+IG G D    R + D+   +A+   R I P
Sbjct: 248 VHVSDVAQAFVAALEHPAAVGRVYNIGSGQD----RSVLDVAGSLAKAMGRDISP 298