Pairwise Alignments

Query, 530 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 318 a.a., nucleoside-diphosphate sugar epimerase from Magnetospirillum magneticum AMB-1

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 83/299 (27%), Positives = 124/299 (41%), Gaps = 45/299 (15%)

Query: 11  VCVTGATGYVGGRLVPRLLDHGWRVRALVR----TPAKLLCRPWARHPRLDIIRGDLDDA 66
           V VTGA G+VG  L  RL + G  V   VR     P  +  RP           G L   
Sbjct: 3   VLVTGANGFVGQPLCRRLAELGHHVAGAVRGQPYLPDCVERRP----------AGRLVAD 52

Query: 67  CSLVPALEGCDAVFYL---VHSMNPHVTGRDTFAKADRAAASNMVRACDEARP---GRII 120
            +   ALEG  AV +L   VH M  H    D  A+   A  +  +R  ++A     G ++
Sbjct: 53  GNWSAALEGMQAVVHLAARVHVM--HDASHDPLAEFRAANGAGTLRLAEQAAQAGIGHLV 110

Query: 121 YLSGLVPEGEE-------------LSPHLRSRAE----VADILARGETPLTVLRAAQILG 163
           +LS +   GEE             + P+  S+ E    +A+I AR    +TVLR   + G
Sbjct: 111 FLSSIKANGEETTHTPFGPLNAAPVDPYGISKLEAEQGLAEIAARTGLAVTVLRPPLVYG 170

Query: 164 SG-SASFEMVRYLVDR-LPVMLTPRWVHSLCQPIAISNVLGYLEGCLDHPETMGQ--TYD 219
            G   +F  +  LV+R LP+ L     H+    I + N++  +   LD P   GQ   + 
Sbjct: 171 PGVKGNFRALIRLVNRGLPLPL-GCCTHNRRSLIGLGNLVDAIRAVLDQPPHPGQCRVFT 229

Query: 220 IGGPDILSYRELFDIFAEVAQLRRRTIIPVPVLSPELSAHWINLVTPIPKALATPLIQG 278
           +   +  S  +L    A  A  R   ++P+PV    L A  +     I +  A+  + G
Sbjct: 230 LCDAEAPSTADLVRSLAR-ALGRPARLLPIPVGLMRLGAGLLGKGAAIQRLTASLEVDG 287