Pairwise Alignments

Query, 386 a.a., DNA polymerase IV (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 352 a.a., DNA polymerase IV from Pectobacterium carotovorum WPP14

 Score =  223 bits (567), Expect = 8e-63
 Identities = 133/336 (39%), Positives = 192/336 (57%), Gaps = 6/336 (1%)

Query: 1   MHIDMDAFFASVEQLDDPSLRGRPVIVGGSSER-GVVSAASYEARRYGVRSAMPTVTARR 59
           +H+DMD F+A++E  D+P LR  P+ +GGS++R GV+S A+Y ARRYGVRSAM T TA R
Sbjct: 5   IHVDMDCFYAAIEMRDNPRLRDIPLAIGGSADRRGVISTANYPARRYGVRSAMATATALR 64

Query: 60  LCPHGVFVSGRRHRYAEVSRMVMAVLHDFSPVVEQASVDEAYLDATGLERLFGPVDEMAQ 119
           LCPH   + GR   Y   SR +  +   ++ ++E  S+DEAYLD T      G    +A+
Sbjct: 65  LCPHLTLLPGRMEVYKSTSRQIREIFSRYTSLIEPLSLDEAYLDVTDSPHCNGSATRIAE 124

Query: 120 RLKGRVREATGGLTCSVGLAPVKFLAKIASDVNKPDGVFILPPEDVAAFLATLPVGRIPG 179
            ++  + +    LT S G+AP+KFLAKIAS++NKP+G +++ PE V  FL TLP+ +IPG
Sbjct: 125 EIRRTIADELN-LTASAGIAPIKFLAKIASELNKPNGQYVITPEQVDDFLLTLPLEKIPG 183

Query: 180 VGKRMLESLDLLGVRTAGDVLRHPVSFWERRFGKGGLVLYDRARGIDPRPLEPWTPPKSE 239
           VGK   + L+  G+ T  DV  + ++   + FGK G VL++R +GID R + P    KS 
Sbjct: 184 VGKVTAKRLEERGLHTCADVRVYALADLLKEFGKFGRVLWERCQGIDERQISPDRLRKSV 243

Query: 240 SAEVTLAADTADRAVLRRWLLAQAERVGGSLRR--QGLAGRTITLKVKYADFRQLTRSRT 297
             E TLA D  D       +    E +   L+R    L      +K+K+ DF+Q T+   
Sbjct: 244 GVEKTLAQDIHDWEQCENLIEQLYEELEVRLKRVKPDLHIARQGVKLKFDDFQQTTQEHV 303

Query: 298 LPEPVSATQTIFEEAWALLEALDLEAKVRLVGLGVS 333
              PV   Q + + A    +       VRLVGL V+
Sbjct: 304 W--PVLNKQDLLKIAQQTWQERRKSRGVRLVGLHVT 337