Pairwise Alignments

Query, 386 a.a., DNA polymerase IV (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 393 a.a., DNA polymerase IV from Magnetospirillum magneticum AMB-1

 Score =  233 bits (593), Expect = 9e-66
 Identities = 144/335 (42%), Positives = 188/335 (56%), Gaps = 6/335 (1%)

Query: 2   HIDMDAFFASVEQLDDPSLRGRPVIVGGSSERGVVSAASYEARRYGVRSAMPTVTARRLC 61
           HID DAF+ASVE+ D+P+L  +PVIVG    RGVV+ A Y AR++G RSAMP   A  LC
Sbjct: 47  HIDCDAFYASVEKRDNPALADKPVIVGHPGGRGVVTTACYVARKFGPRSAMPMFKALELC 106

Query: 62  PHGVFVSGRRHRYAEVSRMVMAVLHDFSPVVEQASVDEAYLDATGLERLFGPVDEMAQRL 121
           PH V +     +Y +VS  + A+    +P+VE  S+DEAYLD +   RL   VD  A  L
Sbjct: 107 PHAVVIPPNIAKYKQVSAQIRALFEKATPLVEPLSLDEAYLDLSPGVRL---VDRPAAVL 163

Query: 122 KGRVREATG---GLTCSVGLAPVKFLAKIASDVNKPDGVFILPPEDVAAFLATLPVGRIP 178
             R+  A     G+T SVGL+  KFLAK+ASD+NKP+G  ++  E+  AFLA  PV  + 
Sbjct: 164 LARLARAIRLQVGITVSVGLSYNKFLAKMASDLNKPEGFSVIGREEAEAFLAPRPVTALF 223

Query: 179 GVGKRMLESLDLLGVRTAGDVLRHPVSFWERRFGKGGLVLYDRARGIDPRPLEPWTPPKS 238
           G+G      +   G+ T   +   P + +  R+GK G  L     GID RP+ P  P KS
Sbjct: 224 GIGAATAARMADQGITTIAQLQALPETEFVARWGKFGRRLAGMVHGIDHRPVNPDRPAKS 283

Query: 239 ESAEVTLAADTADRAVLRRWLLAQAERVGGSLRRQGLAGRTITLKVKYADFRQLTRSRTL 298
            S E T A D  D   L   L   AE V   L R  LAGRT+ LK+K ADF+ +TR   L
Sbjct: 284 VSTETTFARDIRDAKALTEALPPLAEGVARRLERVNLAGRTVVLKLKTADFKVITRHLRL 343

Query: 299 PEPVSATQTIFEEAWALLEALDLEAKVRLVGLGVS 333
           P+P    +TI     ALLE        RL+G+GV+
Sbjct: 344 PDPTGRAETIVRAGLALLERQMDGRAFRLLGIGVT 378