Pairwise Alignments

Query, 386 a.a., DNA polymerase IV (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 351 a.a., DNA polymerase IV (EC 2.7.7.7) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  229 bits (585), Expect = 7e-65
 Identities = 139/350 (39%), Positives = 204/350 (58%), Gaps = 8/350 (2%)

Query: 1   MHIDMDAFFASVEQLDDPSLRGRPVIVGGSSER-GVVSAASYEARRYGVRSAMPTVTARR 59
           +H+DMD FFA+VE  D+P+LR  P+ +GGS ER GV+S A+Y AR++GVRSAMPT  A +
Sbjct: 5   IHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARQFGVRSAMPTAMALK 64

Query: 60  LCPHGVFVSGRRHRYAEVSRMVMAVLHDFSPVVEQASVDEAYLDATGLERLFGPVDEMAQ 119
           LCPH   + GR   Y E SR V  +   ++ ++E  S+DEA+LD T     +G    +A+
Sbjct: 65  LCPHLTLLPGRFDAYKEASRHVRDIFSRYTSLIEPLSLDEAWLDVTDSPHCYGSATLIAR 124

Query: 120 RLKGRVREATGGLTCSVGLAPVKFLAKIASDVNKPDGVFILPPEDVAAFLATLPVGRIPG 179
            ++  +      LT S G+APVKFLAKIASD+NKP+G +++ P DV  FL TLP+ +IPG
Sbjct: 125 EIRQTIFNELQ-LTASAGVAPVKFLAKIASDLNKPNGQYVITPADVPDFLKTLPLAKIPG 183

Query: 180 VGKRMLESLDLLGVRTAGDVLRHPVSFWERRFGKGGLVLYDRARGIDPRPLEPWTPPKSE 239
           VGK     L+ +G+RT GD+ +  ++   +RFGK G VL++R++GID R +      KS 
Sbjct: 184 VGKVSAAKLENMGLRTCGDIQQCDLAMLLKRFGKFGRVLWERSQGIDERDVNSERLRKSV 243

Query: 240 SAEVTLAADT---ADRAVLRRWLLAQAERVGGSLRRQGLAGRTITLKVKYADFRQLTRSR 296
             E TLA D    +D   +   L  + ER    ++   L  R   +K+K+ DF+Q T+  
Sbjct: 244 GVERTLAEDIHEWSDCEAIIEHLYPELERRLAIVKPDLLIARQ-GVKLKFNDFQQTTQEH 302

Query: 297 TLPEPVSATQTIFEEAWALLEALDLEAKVRLVGLGVSHFGGERQMSLPIG 346
             P+     + +   A    +    E  VRLVGL V+    + +  L +G
Sbjct: 303 VWPQ--LNKEDLITTARKTWDERRGERGVRLVGLHVTLLDPQLERQLVLG 350