Pairwise Alignments

Query, 386 a.a., DNA polymerase IV (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 369 a.a., Nucleotidyltransferase/DNA polymerase involved in DNA repair from Kangiella aquimarina DSM 16071

 Score =  202 bits (513), Expect = 2e-56
 Identities = 132/359 (36%), Positives = 192/359 (53%), Gaps = 12/359 (3%)

Query: 1   MHIDMDAFFASVEQLDDPSLRGRPVIVGGSSE-RGVVSAASYEARRYGVRSAMPTVTARR 59
           +H+DMD ++A++E  D+PSL+ +PV VGGS + RGV++  +YEAR YGVRSAMP+  ARR
Sbjct: 15  IHVDMDCYYAAIEMRDEPSLKNQPVAVGGSPDKRGVIATCNYEARSYGVRSAMPSAYARR 74

Query: 60  LCPHGVFVSGRRHRYAEVSRMVMAVLHDFSPVVEQASVDEAYLDATGLERLFGPVDEMAQ 119
           LCP  V V     +Y   S+++  +   ++ ++E  S+DEAYLD T      G    +AQ
Sbjct: 75  LCPGLVIVHPNFDKYRHDSKVIREIFAQYTDLIEPLSLDEAYLDVTECTEYKGSATFIAQ 134

Query: 120 RLKGRVREATGGLTCSVGLAPVKFLAKIASDVNKPDGVFILPPEDVAAFLATLPVGRIPG 179
            ++ ++ E    LT S G+AP KFLAKIASD NKP+G F++ PE+V  F+  LPV +I G
Sbjct: 135 AIRYQIFEKLK-LTASAGVAPNKFLAKIASDWNKPNGQFVITPEEVDDFVKQLPVAKIHG 193

Query: 180 VGKRMLESLDLLGVRTAGDVLRHPVSFWERRFGKGGLVLYDRARGIDPRPLEPWTPPKSE 239
           VGK+  E L  +G+    ++    +    + FG  G  LY+ +RGID RP+    P KS 
Sbjct: 194 VGKKTTEKLHRMGIENCKELREIDLLTLSKTFGSFGQRLYELSRGIDQRPVITHYPRKSL 253

Query: 240 SAEVTLAADTADRAVLRRWLLAQAERVGGSLRRQGLAG--RTITLKVKYADFRQLTRSRT 297
           S E T   D          L    + +   + R G+      +  K+K++DF   T  RT
Sbjct: 254 SVENTYDQDLITLEDCLDELPHLLQTLKRRVARSGVGAPINKLFAKLKFSDFTATTVERT 313

Query: 298 LPEPVSATQTIFEEAWALLEALDLEAK-VRLVGLGVSHFGGERQ--MSLPIGGMPRRDD 353
                     +F E   + E      K VRL+G+GV     E    + LP+      DD
Sbjct: 314 ---SFGINDDLFYE--LMEEGFHRRQKTVRLLGIGVRFQASESTNFVQLPLEYSDLEDD 367