Pairwise Alignments

Query, 386 a.a., DNA polymerase IV (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 352 a.a., DNA polymerase IV from Dickeya dianthicola 67-19

 Score =  212 bits (540), Expect = 1e-59
 Identities = 139/343 (40%), Positives = 189/343 (55%), Gaps = 20/343 (5%)

Query: 1   MHIDMDAFFASVEQLDDPSLRGRPVIVGGSSER-GVVSAASYEARRYGVRSAMPTVTARR 59
           +H+DMD F+A++E  D+P LR  P+ +GGS++R GV+  A+Y ARRYGVRSAM T TA R
Sbjct: 5   IHVDMDCFYAAIEMRDNPRLRDIPLAIGGSADRRGVICTANYPARRYGVRSAMATATALR 64

Query: 60  LCPHGVFVSGRRHRYAEVSRMVMAVLHDFSPVVEQASVDEAYLDATGLERLFGPVDEMAQ 119
           LCPH   + GR   Y   S  +  +   ++ ++E  S+DEAYLD T      G    MAQ
Sbjct: 65  LCPHLTLLPGRMEVYKAASYQIREIFSRYTSLIEPLSLDEAYLDVTDSPHCGGSATLMAQ 124

Query: 120 RLKGRVREATGGLTCSVGLAPVKFLAKIASDVNKPDGVFILPPEDVAAFLATLPVGRIPG 179
            ++  +      LT S G+AP+KFLAKIAS+ NKP+G +++ P  + AFL  L + +IPG
Sbjct: 125 EIRQTIFNELH-LTASAGVAPIKFLAKIASEQNKPNGQYVISPAQMEAFLLALALEKIPG 183

Query: 180 VGKRMLESLDLLGVRTAGDVLRHPVSFWERRFGKGGLVLYDRARGIDPRPLEPWTPPKSE 239
           VGK   + L   G+ T  DV R+ ++   R FGK G VL++   GID R + P    KS 
Sbjct: 184 VGKVTAKRLAECGLHTCADVRRYALADLLREFGKFGRVLWEHCHGIDERQVSPDRLRKSV 243

Query: 240 SAEVTLAAD----TADRAVLRRW---LLAQAERVGGSLR--RQGLAGRTITLKVKYADFR 290
             E TLA D    TA  A++ R    L  +  RV   L   RQG       +K+K+ DFR
Sbjct: 244 GVEKTLAQDIHDWTACEALIERLYDELELRLRRVRPDLHIARQG-------VKLKFDDFR 296

Query: 291 QLTRSRTLPEPVSATQTIFEEAWALLEALDLEAKVRLVGLGVS 333
           Q T+      PV     + + A    E       VRLVGL VS
Sbjct: 297 QTTQEHVW--PVLNKPDLLKLARESWEQRREARGVRLVGLHVS 337