Pairwise Alignments

Query, 386 a.a., DNA polymerase IV (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 405 a.a., DNA polymerase IV from Agrobacterium fabrum C58

 Score =  245 bits (626), Expect = 1e-69
 Identities = 151/378 (39%), Positives = 212/378 (56%), Gaps = 5/378 (1%)

Query: 2   HIDMDAFFASVEQLDDPSLRGRPVIVGGSSERGVVSAASYEARRYGVRSAMPTVTARRLC 61
           HID DAF+ASVE+ D+P L  +PVIVGG  +RGVVS A Y AR +GVRSAMP   A   C
Sbjct: 25  HIDCDAFYASVEKRDNPELADKPVIVGGG-KRGVVSTACYIARIHGVRSAMPMFKALEAC 83

Query: 62  PHGVFVSGRRHRYAEVSRMVMAVLHDFSPVVEQASVDEAYLDATGLERLF-GPVDEMAQR 120
           P  V +     +Y+ V R +  ++ + +P+V+  S+DEA+LD +G E+L   P   +  +
Sbjct: 84  PDAVVIKPDMEKYSRVGREIRTMMQELTPLVQPLSIDEAFLDLSGTEKLHHDPPARVLAK 143

Query: 121 LKGRVREATGGLTCSVGLAPVKFLAKIASDVNKPDGVFILPPEDVAAFLATLPVGRIPGV 180
             GRV +  G ++ S GL+  KFLAK+ASD+ KP G  ++   +  +FLA  PV  I GV
Sbjct: 144 FTGRVEKEVG-VSVSAGLSYCKFLAKVASDLQKPRGFSVVGEAEALSFLAARPVTTIWGV 202

Query: 181 GKRMLESLDLLGVRTAGDVLRHPVSFWERRFGKGGLVLYDRARGIDPRPLEPWTPPKSES 240
           GK    +L+  G+R    +     S   RR+G  G  L+  ARGID R +    P KS S
Sbjct: 203 GKAFAATLEADGIRMIAQLQEMEESELMRRYGVMGQRLFRLARGIDERHVHNNDPVKSVS 262

Query: 241 AEVTLAADTADRAVLRRWLLAQAERVGGSLRRQGLAGRTITLKVKYADFRQLTRSRTLPE 300
           +E T   D +    L   L + +E+V   L++ G+AG+T+ LK+K ADF+  TR+R L +
Sbjct: 263 SETTFFHDISRHEDLVPILRSLSEKVAWRLKKSGIAGQTVVLKMKTADFKSRTRNRRLDD 322

Query: 301 PVSATQTIFEEAWALLEALDLEAKVRLVGLGVSHFGGERQMSLPIGGMPRRDDTRRERLD 360
           P      IF    ALLE      K RL+G+GVS          P   +  R  TRR   +
Sbjct: 323 PTQLADRIFRTGLALLEKETDGTKFRLIGIGVSDLRDAGLADPP--DLVDRQATRRAAAE 380

Query: 361 ATLDRLRARFGAGAVMRG 378
           A +D+LR +FG G+V  G
Sbjct: 381 AAMDKLRDKFGKGSVETG 398