Pairwise Alignments

Query, 1236 a.a., AcrB/AcrD/AcrF family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1021 a.a., efflux RND transporter permease subunit from Dickeya dianthicola ME23

 Score =  369 bits (946), Expect = e-105
 Identities = 272/955 (28%), Positives = 459/955 (48%), Gaps = 37/955 (3%)

Query: 279  HTEPGLVVLDVSTRHDAAALSARLAVFRA-ERVG--ANALHPDLWEPAVFASGDDARAAL 335
            +T PGL    +S +  A     +   ++  +++G  A  L   +  P +     D   AL
Sbjct: 88   YTRPGLAFTMLSLKDSAPPSEVQEEFYQTRKKMGDEAKKLPAGVVGPIINDEYADVTFAL 147

Query: 336  EAVAADRYSWRDLEAYTEKVRATLERLGSVGKVSRWGVRPETIFIDWSQERLASLGLDPQ 395
             A+ A     R L    E +R  L  +  V KV+  G +PE IF+ +S +RLA+LG+ PQ
Sbjct: 148  FALKAKGEPQRLLVRDAEALRQQLLHVPGVKKVNIIGEQPERIFVSFSHDRLATLGVTPQ 207

Query: 396  QVAQTLAARNTSLPGGQLETRGRGVLLDSEGELRSATDLAEVMVATSASGAPLYLRDVAD 455
             +   L  +N   P G +ET+G  V +  +G   +   + +  +   A G  L L DVA 
Sbjct: 208  DIFAALNNQNVLTPAGSIETKGPQVFVRVDGAFDNLEKIRQTPIV--AQGRTLKLSDVAT 265

Query: 456  VTRSYRAPVENLNHFVHRDADGTWRRGKAITLAVEMRSGEHIDAFSREVDAALGDLTQRL 515
            V R Y  P    + F+ R+         A+ L V MR   +     + ++A + ++   L
Sbjct: 266  VERGYEDP----STFMVRN-----NGEPALLLGVVMRDDWNGLKLGQALEAEVTNINATL 316

Query: 516  PEDLLVVRTSDQPRQVTEKVDLFTLSLEEAVVLVVAVAFIGFREWRSALLMALSIPLTLA 575
            P  + + + +DQ   ++  VD F +    A+++V+ V F+    WR  +++A ++PLTLA
Sbjct: 317  PLGMTLSKVTDQAVNISSAVDEFMVKFFVALLVVMMVCFLSMG-WRVGIVVAAAVPLTLA 375

Query: 576  MTFGMMHLLGIDLQQISIASLILALGLLVDDPVVAGDAIKREIAEGRPRRLAAWLGPTKL 635
              F +M   G +  +I++ SLILALGLLVDD ++A + +  ++ EG  R  A+    +  
Sbjct: 376  AVFVIMAASGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYSRIKASAYAWSHT 435

Query: 636  ARAILYATITNIVAYLPFLLLTGDKGRFLYSMPIVVACSLVASRIVSMTFIPLLGSVLL- 694
            A  +L  T+   V ++P        G +  +M  +V  +L+AS +V++ F P LG  +L 
Sbjct: 436  AAPMLSGTLVTAVGFMPNGFARSTAGEYTSNMFWIVGIALIASWVVAVAFTPYLGVKMLP 495

Query: 695  DAGRREGTVEE-RRARGLGRLYYAVGGWAIDHRWKVLAGSLLLVVAGFWLQGQLKPQFFP 753
            D  + EG  +     R   R +  V G  I  +W V    + L V      G +K QFFP
Sbjct: 496  DIKKVEGGHDAIYNTRNYNR-FRQVLGHVIARKWIVAGTVITLFVVSVLGMGAVKKQFFP 554

Query: 754  KDRSYLSYVDLWLPEDATVEATARVAADAARIVTDRVAAFDAETGRAAKGLPPALRSVTV 813
                    V++ +P   ++E T+        I T +V A+ A+   A+         VT 
Sbjct: 555  TSDRPEVLVEVQMPYGTSIEQTS--------IATAKVEAWLAQQKEAS--------IVTS 598

Query: 814  FTGGGGPRFWFSVTPELRQPNYAQLLVEVSDNHLTKELIGPLQQALSERL-PSARADVME 872
            + G G PRF+ +++PEL  P++A+++V   ++   + L   L++A++  L P A+  V +
Sbjct: 599  YIGQGAPRFFLAMSPELPDPSFAKIVVLAGNDKERETLKFRLREAIAGGLAPEAQVRVTQ 658

Query: 873  LENGPPIGVPVQLRLYGDDIPALRAESERLKAILRADPDATRVKDNWGADTFVARLRVDP 932
            +  GPP   PV  R+ G D   LRA ++ +  ++RA P    V  +WG         ++ 
Sbjct: 659  IVFGPPSPFPVAYRVMGPDPDKLRAIADEVGTVMRASPMMRTVNTDWGPRVPTLHFTLNQ 718

Query: 933  DKAALSGVTMLDVARATGNAATGTTVTALREGRLTVPVVSRLRPDERADATDVEGLYVAG 992
            D+    G+T   V+       +G  +T +RE   +V VV R   D R D   +    + G
Sbjct: 719  DRLQAVGLTSNSVSSQLQFLLSGIPLTEVREDIRSVQVVGRAAGDIRLDPARIADFTLVG 778

Query: 993  QGGTRVPLAQIAEPEYGMETARIFRRNQQRCVVISCFPREGVLPSEVVARAMPAIGRFRA 1052
              G R+PL+Q+   +  ME   + RR++   + +     EG+ P +V    M  +     
Sbjct: 779  SAGQRIPLSQVGSVDVRMEDPILRRRDRTPTITVRGDIAEGLQPPDVSTAVMTQLQPIID 838

Query: 1053 DLPPGFRLEFGGEHEEQVKGFKELAGVMGISIAMIYMALLFQFRNAVKPLIVFAAIPYGM 1112
             LP G+R+E  G  EE  K  + +  +  I IA+  + ++ Q R+    ++VF   P G+
Sbjct: 839  RLPSGYRIEQAGSIEESAKATEAMLPLFPIMIALTLLIIILQVRSMAAMVMVFLTSPLGL 898

Query: 1113 TGAFAALRLMGQPFGFMAFLGIASLIGVIVSHIIVLFDFIEEKREEGEDLRTALLDAGIV 1172
             G    L L  QPFG  A +G+ +L G+++ + ++L   I    +EG D   A+++A + 
Sbjct: 899  IGVVPTLLLFQQPFGINALVGLIALSGILMRNTLILIGQIHHNEQEGLDPFRAVVEATVQ 958

Query: 1173 RLRPVMITVAATVIALFPLALHGGALWEPLCYAQAGGLTVATFVTLLMVPVLYAI 1227
            R RPV++T  A ++A  PL       W  L Y   GG    T +TL+ +P +Y+I
Sbjct: 959  RARPVILTALAAILAFIPLT--HSVFWGTLAYTLIGGTLAGTVLTLVFLPAMYSI 1011



 Score = 55.5 bits (132), Expect = 2e-11
 Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 4/129 (3%)

Query: 16  NSARFFVEQRHIGWVLLVATLVWGVWAWHAMPQRKDPEIPVRAAAVLVAWPGAPAERVEE 75
           N +   V +R I   L+    V GV A+  + + +DP   ++   ++ AWPGA A+ +++
Sbjct: 7   NLSALAVRERAITLFLIFLIFVAGVLAFFQLGRAEDPPFTIKQMTIITAWPGATAQEMQD 66

Query: 76  RITRRVEEAVGGNKWVEKIESVSRTGLSVVTLHLHERVAQTDTVLDDIGFRLQ---EVGQ 132
           ++   +E+ +   +W ++ E+ +R GL+   L L +    ++   +    R +   E  +
Sbjct: 67  QVAEPLEKRLQELRWYDRTETYTRPGLAFTMLSLKDSAPPSEVQEEFYQTRKKMGDEAKK 126

Query: 133 LPDG-AGPL 140
           LP G  GP+
Sbjct: 127 LPAGVVGPI 135