Pairwise Alignments

Query, 235 a.a., flagellar biosynthetic protein fliP (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 245 a.a., flagellar biosynthetic protein from Agrobacterium fabrum C58

 Score =  182 bits (462), Expect = 5e-51
 Identities = 87/199 (43%), Positives = 136/199 (68%), Gaps = 2/199 (1%)

Query: 37  MLTVLSLAPAIMLTVTSFTRIIIVFHFVRQALGVQALPPSQVLASLAIFMTVVIMTPVGK 96
           +LTVLS+AP I++ VTSF R +I F  +R  +G+ + P + +L S+A+FMT  +M+P   
Sbjct: 46  LLTVLSVAPGILIMVTSFPRFVIAFSILRSGMGLASTPSNMILLSMAMFMTFYVMSPTFD 105

Query: 97  EINDNALQPYLREEIGFNEALKKAEAPMRTFMFKHTREKDLSVFYAVTKMEQPRSKDD-- 154
           +   + +QP L+ +I   +A+++   P RTFM  +TR+KDL +F  + +        D  
Sbjct: 106 KAWTDGVQPLLQNQINEQQAVQRIAEPFRTFMNANTRDKDLKLFVDIARERGQVVMTDNV 165

Query: 155 VPTIMLAAGYVISELKTGFTIGFLIYIPFLILDMVISSILLAMGMMMLPPMMVSMPFKLL 214
           V   +L   +++SE++ GF IGFLI +PFL++D+++++I +AMGMMMLPP  +S+PFK+L
Sbjct: 166 VDYRVLVPAFMLSEIRRGFEIGFLIILPFLVIDLIVATITMAMGMMMLPPTSISLPFKIL 225

Query: 215 LFVMVDGWGLLVGSLVNSF 233
            FV++DGW LLVGSLV SF
Sbjct: 226 FFVLIDGWNLLVGSLVRSF 244



 Score = 22.3 bits (46), Expect = 0.009
 Identities = 8/33 (24%), Positives = 18/33 (54%)

Query: 8   DVVMPTMQLTLAAGRTEPEKVSLTLEILFMLTV 40
           D+++ T+ + +      P  +SL  +ILF + +
Sbjct: 198 DLIVATITMAMGMMMLPPTSISLPFKILFFVLI 230