Pairwise Alignments

Query, 249 a.a., RNA methyltransferase, TrmH family, group 3 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 248 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB from Pseudomonas putida KT2440

 Score =  122 bits (307), Expect = 5e-33
 Identities = 79/232 (34%), Positives = 117/232 (50%), Gaps = 6/232 (2%)

Query: 10  GLKPVLELLASDPARIDTVFIRRGRRTPDTDRLMDLCREMRVRFSLVEGQVLDKLYAGGH 69
           G+  V  LL   P R+  +++  GR  P  + L+ L  E RV     E + +D    G H
Sbjct: 9   GVHAVQALLQHHPKRVKQIWLSEGRSEPRLETLLALAAENRVPVGQAERREMDAWVEGVH 68

Query: 70  QGVVARLFEA---GYVELDDLLQDAPDAPLPLIIALDQVQDPGNAGTLARSLYALGGAGL 126
           QGVVA +  +   G + L++LL+   + P PLI+ LD V DP N G   R+  A G   +
Sbjct: 69  QGVVAEVSPSQVWGELMLEELLERT-ETP-PLILVLDGVTDPHNLGACLRTADAAGATAV 126

Query: 127 IVPRHNAAYLGAGAHRAAAGALEKLPVARVANLARALDEAAEAGYAIYGAMCGEGSVNAF 186
           IVP+  +A L     + A GA E +P+  V NLAR L++  + G  + G   GE     +
Sbjct: 127 IVPKDKSATLTPVVRKVACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGT-AGEAEQEIY 185

Query: 187 TATLRTPCVLVLGNEDKGIRPNVAKRCDTLLHIPMLRDFDSFNVAQAGALLL 238
              L  P V+++G E KG+R    + CD L+ +PM     S NV+ A  + L
Sbjct: 186 QQDLTGPLVMIMGAEGKGMRRLTREHCDFLVKLPMAGSVSSLNVSVATGVCL 237